Hb_004195_090

Information

Type -
Description -
Location Contig4195: 120434-122237
Sequence    

Annotation

kegg
ID rcu:RCOM_0534720
description Mitochondrial chaperone BCS1, putative
nr
ID XP_012092594.1
description PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
swissprot
ID P32839
description Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
trembl
ID A0A067LIU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22142 PE=3 SV=1
Gene Ontology
ID GO:0005524
description probable mitochondrial chaperone bcs1-a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41419: 120905-122211
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_090 0.0 - - PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
2 Hb_001341_200 0.1315617382 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
3 Hb_009736_010 0.1524470984 - - conserved hypothetical protein [Ricinus communis]
4 Hb_029584_090 0.1604021997 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
5 Hb_030944_010 0.1615246479 - - PREDICTED: uncharacterized protein LOC105633455 [Jatropha curcas]
6 Hb_000059_300 0.1638286493 - - caspase, putative [Ricinus communis]
7 Hb_032631_050 0.1710687684 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
8 Hb_001287_060 0.1717389881 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
9 Hb_006573_300 0.1743258046 - - ATP binding protein, putative [Ricinus communis]
10 Hb_004495_020 0.1790710454 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_005181_180 0.1871700509 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000832_280 0.187340175 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
13 Hb_000963_200 0.18860011 - - beta-galactosidase, putative [Ricinus communis]
14 Hb_000181_210 0.1929069198 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
15 Hb_001170_010 0.1958336601 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_000057_080 0.1979295283 - - PREDICTED: probable ATP-dependent RNA helicase DDX11 [Jatropha curcas]
17 Hb_000853_060 0.199053594 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
18 Hb_032225_030 0.1999148698 - - PREDICTED: leucine-rich repeat extensin-like protein 2 [Jatropha curcas]
19 Hb_001021_030 0.2000788712 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
20 Hb_042509_020 0.2003004854 - - hypothetical protein JCGZ_19555 [Jatropha curcas]

Gene co-expression network

sample Hb_004195_090 Hb_004195_090 Hb_001341_200 Hb_001341_200 Hb_004195_090--Hb_001341_200 Hb_009736_010 Hb_009736_010 Hb_004195_090--Hb_009736_010 Hb_029584_090 Hb_029584_090 Hb_004195_090--Hb_029584_090 Hb_030944_010 Hb_030944_010 Hb_004195_090--Hb_030944_010 Hb_000059_300 Hb_000059_300 Hb_004195_090--Hb_000059_300 Hb_032631_050 Hb_032631_050 Hb_004195_090--Hb_032631_050 Hb_009646_010 Hb_009646_010 Hb_001341_200--Hb_009646_010 Hb_005181_180 Hb_005181_180 Hb_001341_200--Hb_005181_180 Hb_004495_020 Hb_004495_020 Hb_001341_200--Hb_004495_020 Hb_001341_200--Hb_029584_090 Hb_000139_140 Hb_000139_140 Hb_001341_200--Hb_000139_140 Hb_009545_020 Hb_009545_020 Hb_009736_010--Hb_009545_020 Hb_031527_060 Hb_031527_060 Hb_009736_010--Hb_031527_060 Hb_001170_010 Hb_001170_010 Hb_009736_010--Hb_001170_010 Hb_004724_450 Hb_004724_450 Hb_009736_010--Hb_004724_450 Hb_124315_030 Hb_124315_030 Hb_009736_010--Hb_124315_030 Hb_000963_200 Hb_000963_200 Hb_029584_090--Hb_000963_200 Hb_029584_090--Hb_004495_020 Hb_029584_090--Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_029584_090--Hb_000421_270 Hb_002025_350 Hb_002025_350 Hb_029584_090--Hb_002025_350 Hb_030944_010--Hb_000059_300 Hb_000057_080 Hb_000057_080 Hb_030944_010--Hb_000057_080 Hb_000832_280 Hb_000832_280 Hb_030944_010--Hb_000832_280 Hb_030944_010--Hb_001341_200 Hb_000856_050 Hb_000856_050 Hb_030944_010--Hb_000856_050 Hb_001486_200 Hb_001486_200 Hb_000059_300--Hb_001486_200 Hb_005779_030 Hb_005779_030 Hb_000059_300--Hb_005779_030 Hb_000056_350 Hb_000056_350 Hb_000059_300--Hb_000056_350 Hb_000059_300--Hb_009646_010 Hb_000059_300--Hb_001341_200 Hb_000181_210 Hb_000181_210 Hb_000059_300--Hb_000181_210 Hb_032631_050--Hb_000421_270 Hb_001348_210 Hb_001348_210 Hb_032631_050--Hb_001348_210 Hb_011200_020 Hb_011200_020 Hb_032631_050--Hb_011200_020 Hb_032631_050--Hb_000963_200 Hb_032631_050--Hb_002025_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.421036 14.1913 3.54761 16.9045 0.785553 0.146217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.98706 3.57874 3.05028 24.4122 1.99337

CAGE analysis