Hb_030944_010

Information

Type -
Description -
Location Contig30944: 6259-6642
Sequence    

Annotation

kegg
ID rcu:RCOM_0702130
description hypothetical protein
nr
ID XP_012071429.1
description PREDICTED: uncharacterized protein LOC105633455 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQX5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03974 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030944_010 0.0 - - PREDICTED: uncharacterized protein LOC105633455 [Jatropha curcas]
2 Hb_004195_090 0.1615246479 - - PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
3 Hb_000059_300 0.1702825518 - - caspase, putative [Ricinus communis]
4 Hb_000057_080 0.1735716407 - - PREDICTED: probable ATP-dependent RNA helicase DDX11 [Jatropha curcas]
5 Hb_000832_280 0.1856978933 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
6 Hb_001341_200 0.1870505552 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
7 Hb_000856_050 0.1870543715 - - PREDICTED: HIPL1 protein-like [Jatropha curcas]
8 Hb_001287_060 0.1914289835 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
9 Hb_000002_360 0.1970405911 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
10 Hb_001456_050 0.1995412983 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
11 Hb_105660_010 0.2047537484 - - PREDICTED: potassium channel AKT6-like [Jatropha curcas]
12 Hb_000056_350 0.2068904635 - - PREDICTED: uncharacterized protein LOC105630437 [Jatropha curcas]
13 Hb_000913_080 0.2109274317 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 11 [Jatropha curcas]
14 Hb_005618_090 0.212366656 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA20, putative [Ricinus communis]
15 Hb_009736_010 0.2131749691 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000172_050 0.2150870264 - - PREDICTED: uncharacterized protein LOC105650611 [Jatropha curcas]
17 Hb_001366_060 0.2151504867 - - -
18 Hb_003010_010 0.2185654316 - - PREDICTED: uncharacterized protein LOC105633673 [Jatropha curcas]
19 Hb_009646_010 0.2190005638 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
20 Hb_029584_090 0.2204586683 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]

Gene co-expression network

sample Hb_030944_010 Hb_030944_010 Hb_004195_090 Hb_004195_090 Hb_030944_010--Hb_004195_090 Hb_000059_300 Hb_000059_300 Hb_030944_010--Hb_000059_300 Hb_000057_080 Hb_000057_080 Hb_030944_010--Hb_000057_080 Hb_000832_280 Hb_000832_280 Hb_030944_010--Hb_000832_280 Hb_001341_200 Hb_001341_200 Hb_030944_010--Hb_001341_200 Hb_000856_050 Hb_000856_050 Hb_030944_010--Hb_000856_050 Hb_004195_090--Hb_001341_200 Hb_009736_010 Hb_009736_010 Hb_004195_090--Hb_009736_010 Hb_029584_090 Hb_029584_090 Hb_004195_090--Hb_029584_090 Hb_004195_090--Hb_000059_300 Hb_032631_050 Hb_032631_050 Hb_004195_090--Hb_032631_050 Hb_001486_200 Hb_001486_200 Hb_000059_300--Hb_001486_200 Hb_005779_030 Hb_005779_030 Hb_000059_300--Hb_005779_030 Hb_000056_350 Hb_000056_350 Hb_000059_300--Hb_000056_350 Hb_009646_010 Hb_009646_010 Hb_000059_300--Hb_009646_010 Hb_000059_300--Hb_001341_200 Hb_000181_210 Hb_000181_210 Hb_000059_300--Hb_000181_210 Hb_006922_090 Hb_006922_090 Hb_000057_080--Hb_006922_090 Hb_001287_060 Hb_001287_060 Hb_000057_080--Hb_001287_060 Hb_000139_140 Hb_000139_140 Hb_000057_080--Hb_000139_140 Hb_001366_060 Hb_001366_060 Hb_000057_080--Hb_001366_060 Hb_001022_050 Hb_001022_050 Hb_000057_080--Hb_001022_050 Hb_000832_280--Hb_000181_210 Hb_000832_280--Hb_001287_060 Hb_000832_280--Hb_000056_350 Hb_004324_030 Hb_004324_030 Hb_000832_280--Hb_004324_030 Hb_000002_360 Hb_000002_360 Hb_000832_280--Hb_000002_360 Hb_026549_050 Hb_026549_050 Hb_000832_280--Hb_026549_050 Hb_001341_200--Hb_009646_010 Hb_005181_180 Hb_005181_180 Hb_001341_200--Hb_005181_180 Hb_004495_020 Hb_004495_020 Hb_001341_200--Hb_004495_020 Hb_001341_200--Hb_029584_090 Hb_001341_200--Hb_000139_140 Hb_105660_010 Hb_105660_010 Hb_000856_050--Hb_105660_010 Hb_000172_050 Hb_000172_050 Hb_000856_050--Hb_000172_050 Hb_004453_180 Hb_004453_180 Hb_000856_050--Hb_004453_180 Hb_005539_260 Hb_005539_260 Hb_000856_050--Hb_005539_260 Hb_006925_070 Hb_006925_070 Hb_000856_050--Hb_006925_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.272558 21.1311 10.5464 29.1474 0.638219 0.166172
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.82689 5.59442 4.28417 21.687 0.587405

CAGE analysis