Hb_127886_010

Information

Type -
Description -
Location Contig127886: 9046-9810
Sequence    

Annotation

kegg
ID rcu:RCOM_0934290
description hypothetical protein
nr
ID XP_012081133.1
description PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KEG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16986 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_127886_010 0.0 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
2 Hb_006717_070 0.1076630309 transcription factor TF Family: MYB-related PREDICTED: transcription factor CPC-like [Jatropha curcas]
3 Hb_000645_210 0.1278523822 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
4 Hb_000227_040 0.1284839385 - - Stem-specific protein TSJT1, putative [Ricinus communis]
5 Hb_000395_220 0.1392968017 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
6 Hb_001780_150 0.1440506904 - - ceramidase, putative [Ricinus communis]
7 Hb_011287_010 0.1473141285 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_009732_020 0.1487953874 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
9 Hb_012545_090 0.1503589639 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
10 Hb_003517_020 0.1529576756 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 3-like [Jatropha curcas]
11 Hb_000702_060 0.1551186176 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000362_110 0.1556792248 - - PREDICTED: uncharacterized protein LOC104612097 isoform X2 [Nelumbo nucifera]
13 Hb_000093_150 0.155774441 - - 6-phosphogluconolactonase, putative [Ricinus communis]
14 Hb_007426_140 0.1602493163 - - ornithine aminotransferase, putative [Ricinus communis]
15 Hb_003576_050 0.1626078729 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
16 Hb_000928_040 0.1635190187 - - cytochrome P450, putative [Ricinus communis]
17 Hb_001828_020 0.1648072969 - - hypothetical protein CISIN_1g010132mg [Citrus sinensis]
18 Hb_002217_220 0.1649568755 - - hypothetical protein POPTR_0010s15930g [Populus trichocarpa]
19 Hb_001726_110 0.1662363494 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 19 [Jatropha curcas]
20 Hb_003813_120 0.1726030983 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_127886_010 Hb_127886_010 Hb_006717_070 Hb_006717_070 Hb_127886_010--Hb_006717_070 Hb_000645_210 Hb_000645_210 Hb_127886_010--Hb_000645_210 Hb_000227_040 Hb_000227_040 Hb_127886_010--Hb_000227_040 Hb_000395_220 Hb_000395_220 Hb_127886_010--Hb_000395_220 Hb_001780_150 Hb_001780_150 Hb_127886_010--Hb_001780_150 Hb_011287_010 Hb_011287_010 Hb_127886_010--Hb_011287_010 Hb_009732_020 Hb_009732_020 Hb_006717_070--Hb_009732_020 Hb_003626_040 Hb_003626_040 Hb_006717_070--Hb_003626_040 Hb_006717_070--Hb_000395_220 Hb_000362_110 Hb_000362_110 Hb_006717_070--Hb_000362_110 Hb_003813_120 Hb_003813_120 Hb_006717_070--Hb_003813_120 Hb_000928_040 Hb_000928_040 Hb_000645_210--Hb_000928_040 Hb_001206_090 Hb_001206_090 Hb_000645_210--Hb_001206_090 Hb_031527_060 Hb_031527_060 Hb_000645_210--Hb_031527_060 Hb_001114_070 Hb_001114_070 Hb_000645_210--Hb_001114_070 Hb_000093_150 Hb_000093_150 Hb_000645_210--Hb_000093_150 Hb_000227_040--Hb_009732_020 Hb_000227_040--Hb_011287_010 Hb_012545_090 Hb_012545_090 Hb_000227_040--Hb_012545_090 Hb_000227_040--Hb_000395_220 Hb_000227_040--Hb_001780_150 Hb_012760_040 Hb_012760_040 Hb_000227_040--Hb_012760_040 Hb_007426_140 Hb_007426_140 Hb_000395_220--Hb_007426_140 Hb_083799_010 Hb_083799_010 Hb_000395_220--Hb_083799_010 Hb_000395_220--Hb_009732_020 Hb_000395_220--Hb_001780_150 Hb_002272_170 Hb_002272_170 Hb_000395_220--Hb_002272_170 Hb_000395_220--Hb_011287_010 Hb_001780_150--Hb_011287_010 Hb_075315_010 Hb_075315_010 Hb_001780_150--Hb_075315_010 Hb_001780_150--Hb_007426_140 Hb_002851_010 Hb_002851_010 Hb_001780_150--Hb_002851_010 Hb_002217_220 Hb_002217_220 Hb_011287_010--Hb_002217_220 Hb_000260_660 Hb_000260_660 Hb_011287_010--Hb_000260_660 Hb_001642_070 Hb_001642_070 Hb_011287_010--Hb_001642_070 Hb_011287_010--Hb_012760_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.01335 4.81124 1.90775 3.63515 0.960578 1.86795
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.00304 1.35195 1.52196 11.5557 0.900443

CAGE analysis