Hb_000805_320

Information

Type -
Description -
Location Contig805: 288554-302745
Sequence    

Annotation

kegg
ID rcu:RCOM_1257270
description hypothetical protein
nr
ID XP_012092552.1
description PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
swissprot
ID O74545
description Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
trembl
ID A0A067KSN1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04656 PE=4 SV=1
Gene Ontology
ID GO:0005634
description hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59005: 288750-290811 , PASA_asmbl_59006: 296565-296723 , PASA_asmbl_59007: 299821-300862
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000805_320 0.0 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
2 Hb_094437_060 0.1420891572 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
3 Hb_004242_190 0.1568247703 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
4 Hb_105602_010 0.156892455 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
5 Hb_001258_060 0.1648023413 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
6 Hb_003073_180 0.168723814 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
7 Hb_014894_010 0.1691370523 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
8 Hb_080147_100 0.1699687746 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]
9 Hb_009687_010 0.1766973026 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X4 [Jatropha curcas]
10 Hb_002027_140 0.176951975 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
11 Hb_138710_010 0.1775717683 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
12 Hb_006816_200 0.1826418755 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004064_010 0.1842124669 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
14 Hb_000621_020 0.1905119309 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
15 Hb_008864_090 0.191261605 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
16 Hb_119494_010 0.1956814815 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
17 Hb_138585_110 0.2017284088 - - -
18 Hb_004079_080 0.201748659 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
19 Hb_001332_040 0.2035612004 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
20 Hb_000676_190 0.2041482057 - - hypothetical protein JCGZ_08279 [Jatropha curcas]

Gene co-expression network

sample Hb_000805_320 Hb_000805_320 Hb_094437_060 Hb_094437_060 Hb_000805_320--Hb_094437_060 Hb_004242_190 Hb_004242_190 Hb_000805_320--Hb_004242_190 Hb_105602_010 Hb_105602_010 Hb_000805_320--Hb_105602_010 Hb_001258_060 Hb_001258_060 Hb_000805_320--Hb_001258_060 Hb_003073_180 Hb_003073_180 Hb_000805_320--Hb_003073_180 Hb_014894_010 Hb_014894_010 Hb_000805_320--Hb_014894_010 Hb_138710_010 Hb_138710_010 Hb_094437_060--Hb_138710_010 Hb_001355_130 Hb_001355_130 Hb_094437_060--Hb_001355_130 Hb_005873_010 Hb_005873_010 Hb_094437_060--Hb_005873_010 Hb_007432_020 Hb_007432_020 Hb_094437_060--Hb_007432_020 Hb_094437_060--Hb_105602_010 Hb_004242_190--Hb_001258_060 Hb_028872_060 Hb_028872_060 Hb_004242_190--Hb_028872_060 Hb_006816_200 Hb_006816_200 Hb_004242_190--Hb_006816_200 Hb_002407_080 Hb_002407_080 Hb_004242_190--Hb_002407_080 Hb_003120_030 Hb_003120_030 Hb_004242_190--Hb_003120_030 Hb_009687_010 Hb_009687_010 Hb_105602_010--Hb_009687_010 Hb_004064_010 Hb_004064_010 Hb_105602_010--Hb_004064_010 Hb_000621_020 Hb_000621_020 Hb_105602_010--Hb_000621_020 Hb_003266_100 Hb_003266_100 Hb_105602_010--Hb_003266_100 Hb_001332_040 Hb_001332_040 Hb_105602_010--Hb_001332_040 Hb_000103_270 Hb_000103_270 Hb_105602_010--Hb_000103_270 Hb_001258_060--Hb_014894_010 Hb_008864_090 Hb_008864_090 Hb_001258_060--Hb_008864_090 Hb_001246_030 Hb_001246_030 Hb_001258_060--Hb_001246_030 Hb_007763_030 Hb_007763_030 Hb_001258_060--Hb_007763_030 Hb_003073_180--Hb_002407_080 Hb_000209_110 Hb_000209_110 Hb_003073_180--Hb_000209_110 Hb_003073_180--Hb_001258_060 Hb_080147_100 Hb_080147_100 Hb_003073_180--Hb_080147_100 Hb_006586_030 Hb_006586_030 Hb_003073_180--Hb_006586_030 Hb_014894_010--Hb_001246_030 Hb_119494_010 Hb_119494_010 Hb_014894_010--Hb_119494_010 Hb_002005_100 Hb_002005_100 Hb_014894_010--Hb_002005_100 Hb_004079_080 Hb_004079_080 Hb_014894_010--Hb_004079_080 Hb_014894_010--Hb_008864_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24269 1.46993 1.10886 1.21506 2.05488 1.36175
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.83473 4.21504 1.9988 10.9968 0.408399

CAGE analysis