Hb_156554_010

Information

Type -
Description -
Location Contig156554: 31-796
Sequence    

Annotation

kegg
ID cic:CICLE_v10010865mg
description hypothetical protein
nr
ID XP_012086248.1
description PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
swissprot
ID Q7XA39
description Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
trembl
ID A0A067K2K1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21067 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156554_010 0.0 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
2 Hb_011349_010 0.1706533167 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
3 Hb_000123_200 0.2470103972 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
4 Hb_160366_010 0.2555165331 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
5 Hb_002099_010 0.2566290927 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
6 Hb_007416_040 0.2945319972 - - glutamate receptor 2 plant, putative [Ricinus communis]
7 Hb_000613_150 0.3253401246 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
8 Hb_001136_120 0.3411436102 - - -
9 Hb_000181_190 0.3562861314 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
10 Hb_101319_020 0.3610897916 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
11 Hb_007386_010 0.3630926122 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
12 Hb_001348_200 0.3685944187 - - -
13 Hb_001332_030 0.3735077128 - - hypothetical protein JCGZ_21111 [Jatropha curcas]
14 Hb_004491_020 0.3747169162 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
15 Hb_000264_150 0.3750181973 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
16 Hb_001722_090 0.3773982347 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
17 Hb_001709_100 0.3774951033 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
18 Hb_021906_010 0.377834803 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
19 Hb_001247_340 0.3782419653 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
20 Hb_014430_010 0.3793235746 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_156554_010 Hb_156554_010 Hb_011349_010 Hb_011349_010 Hb_156554_010--Hb_011349_010 Hb_000123_200 Hb_000123_200 Hb_156554_010--Hb_000123_200 Hb_160366_010 Hb_160366_010 Hb_156554_010--Hb_160366_010 Hb_002099_010 Hb_002099_010 Hb_156554_010--Hb_002099_010 Hb_007416_040 Hb_007416_040 Hb_156554_010--Hb_007416_040 Hb_000613_150 Hb_000613_150 Hb_156554_010--Hb_000613_150 Hb_011349_010--Hb_000123_200 Hb_011349_010--Hb_160366_010 Hb_011349_010--Hb_007416_040 Hb_004324_170 Hb_004324_170 Hb_011349_010--Hb_004324_170 Hb_007545_040 Hb_007545_040 Hb_011349_010--Hb_007545_040 Hb_000123_200--Hb_160366_010 Hb_000123_200--Hb_002099_010 Hb_000123_200--Hb_007416_040 Hb_000175_580 Hb_000175_580 Hb_000123_200--Hb_000175_580 Hb_160366_010--Hb_002099_010 Hb_160366_010--Hb_007416_040 Hb_160366_010--Hb_000175_580 Hb_021906_010 Hb_021906_010 Hb_002099_010--Hb_021906_010 Hb_007386_010 Hb_007386_010 Hb_002099_010--Hb_007386_010 Hb_002259_140 Hb_002259_140 Hb_002099_010--Hb_002259_140 Hb_002099_010--Hb_000175_580 Hb_000094_260 Hb_000094_260 Hb_007416_040--Hb_000094_260 Hb_002272_190 Hb_002272_190 Hb_007416_040--Hb_002272_190 Hb_001865_110 Hb_001865_110 Hb_007416_040--Hb_001865_110 Hb_000317_530 Hb_000317_530 Hb_000613_150--Hb_000317_530 Hb_012163_030 Hb_012163_030 Hb_000613_150--Hb_012163_030 Hb_001632_030 Hb_001632_030 Hb_000613_150--Hb_001632_030 Hb_000402_110 Hb_000402_110 Hb_000613_150--Hb_000402_110 Hb_003124_180 Hb_003124_180 Hb_000613_150--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_000613_150--Hb_026740_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.103712 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0791734 0.062243 0 0 0

CAGE analysis