Hb_000212_480

Information

Type -
Description -
Location Contig212: 465514-466515
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000212_480 0.0 - - -
2 Hb_009083_040 0.1297841658 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
3 Hb_000377_100 0.2817523116 - - LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like protein [Theobroma cacao]
4 Hb_001999_270 0.3108578947 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
5 Hb_001136_120 0.3390449076 - - -
6 Hb_001080_110 0.3953695705 - - -
7 Hb_002272_190 0.4066912436 - - Kinesin heavy chain, putative [Ricinus communis]
8 Hb_001247_340 0.4072426509 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
9 Hb_002259_010 0.4094562255 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004491_020 0.4121907645 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
11 Hb_162189_010 0.4123986844 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_007545_040 0.4132922002 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
13 Hb_000264_150 0.4135404213 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
14 Hb_004324_170 0.4144533936 - - -
15 Hb_001722_090 0.4192435616 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
16 Hb_001709_100 0.4194286863 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
17 Hb_002194_080 0.4237195735 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]
18 Hb_156850_010 0.4262416082 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
19 Hb_000803_130 0.433603399 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005489_030 0.4363246199 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_000212_480 Hb_000212_480 Hb_009083_040 Hb_009083_040 Hb_000212_480--Hb_009083_040 Hb_000377_100 Hb_000377_100 Hb_000212_480--Hb_000377_100 Hb_001999_270 Hb_001999_270 Hb_000212_480--Hb_001999_270 Hb_001136_120 Hb_001136_120 Hb_000212_480--Hb_001136_120 Hb_001080_110 Hb_001080_110 Hb_000212_480--Hb_001080_110 Hb_002272_190 Hb_002272_190 Hb_000212_480--Hb_002272_190 Hb_009083_040--Hb_001999_270 Hb_009083_040--Hb_000377_100 Hb_004324_170 Hb_004324_170 Hb_009083_040--Hb_004324_170 Hb_007545_040 Hb_007545_040 Hb_009083_040--Hb_007545_040 Hb_162189_010 Hb_162189_010 Hb_009083_040--Hb_162189_010 Hb_002194_080 Hb_002194_080 Hb_000377_100--Hb_002194_080 Hb_048110_010 Hb_048110_010 Hb_000377_100--Hb_048110_010 Hb_004449_190 Hb_004449_190 Hb_000377_100--Hb_004449_190 Hb_002352_040 Hb_002352_040 Hb_000377_100--Hb_002352_040 Hb_015183_040 Hb_015183_040 Hb_001999_270--Hb_015183_040 Hb_105061_010 Hb_105061_010 Hb_001999_270--Hb_105061_010 Hb_034243_030 Hb_034243_030 Hb_001999_270--Hb_034243_030 Hb_006831_060 Hb_006831_060 Hb_001999_270--Hb_006831_060 Hb_005489_030 Hb_005489_030 Hb_001999_270--Hb_005489_030 Hb_007416_040 Hb_007416_040 Hb_001136_120--Hb_007416_040 Hb_001136_120--Hb_002272_190 Hb_012532_030 Hb_012532_030 Hb_001136_120--Hb_012532_030 Hb_171529_010 Hb_171529_010 Hb_001136_120--Hb_171529_010 Hb_156554_010 Hb_156554_010 Hb_001136_120--Hb_156554_010 Hb_001080_110--Hb_009083_040 Hb_012193_020 Hb_012193_020 Hb_001080_110--Hb_012193_020 Hb_009078_040 Hb_009078_040 Hb_001080_110--Hb_009078_040 Hb_000080_050 Hb_000080_050 Hb_001080_110--Hb_000080_050 Hb_049901_010 Hb_049901_010 Hb_001080_110--Hb_049901_010 Hb_034454_020 Hb_034454_020 Hb_001080_110--Hb_034454_020 Hb_002272_190--Hb_007416_040 Hb_001865_110 Hb_001865_110 Hb_002272_190--Hb_001865_110 Hb_005222_020 Hb_005222_020 Hb_002272_190--Hb_005222_020 Hb_000094_260 Hb_000094_260 Hb_002272_190--Hb_000094_260 Hb_007761_050 Hb_007761_050 Hb_002272_190--Hb_007761_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.138803 0 0 0.116801
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140679 0 0 0 0

CAGE analysis