Hb_001080_110

Information

Type -
Description -
Location Contig1080: 58681-59530
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001080_110 0.0 - - -
2 Hb_009083_040 0.3219887798 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
3 Hb_012193_020 0.3523196778 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
4 Hb_009078_040 0.3613371713 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
5 Hb_000080_050 0.361860661 - - PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Vitis vinifera]
6 Hb_049901_010 0.3637497278 - - PREDICTED: uncharacterized protein LOC105766879 [Gossypium raimondii]
7 Hb_034454_020 0.3637648744 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_037271_010 0.3649333217 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
9 Hb_000031_040 0.3674483766 - - centromere protein O [Medicago truncatula]
10 Hb_004532_010 0.3675127306 - - PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
11 Hb_087999_010 0.3701408808 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
12 Hb_000093_070 0.3703078539 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
13 Hb_132840_040 0.372656528 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
14 Hb_000425_050 0.3757431837 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
15 Hb_009563_020 0.3757716681 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_007287_020 0.375825813 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
17 Hb_001147_100 0.3758986586 - - polyprotein [Citrus endogenous pararetrovirus]
18 Hb_000599_060 0.3760240166 - - PREDICTED: legumin A-like [Jatropha curcas]
19 Hb_004800_040 0.3760705189 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
20 Hb_175651_010 0.3763228943 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_001080_110 Hb_001080_110 Hb_009083_040 Hb_009083_040 Hb_001080_110--Hb_009083_040 Hb_012193_020 Hb_012193_020 Hb_001080_110--Hb_012193_020 Hb_009078_040 Hb_009078_040 Hb_001080_110--Hb_009078_040 Hb_000080_050 Hb_000080_050 Hb_001080_110--Hb_000080_050 Hb_049901_010 Hb_049901_010 Hb_001080_110--Hb_049901_010 Hb_034454_020 Hb_034454_020 Hb_001080_110--Hb_034454_020 Hb_000212_480 Hb_000212_480 Hb_009083_040--Hb_000212_480 Hb_001999_270 Hb_001999_270 Hb_009083_040--Hb_001999_270 Hb_000377_100 Hb_000377_100 Hb_009083_040--Hb_000377_100 Hb_004324_170 Hb_004324_170 Hb_009083_040--Hb_004324_170 Hb_007545_040 Hb_007545_040 Hb_009083_040--Hb_007545_040 Hb_162189_010 Hb_162189_010 Hb_009083_040--Hb_162189_010 Hb_004532_010 Hb_004532_010 Hb_012193_020--Hb_004532_010 Hb_000599_060 Hb_000599_060 Hb_012193_020--Hb_000599_060 Hb_001809_040 Hb_001809_040 Hb_012193_020--Hb_001809_040 Hb_183366_010 Hb_183366_010 Hb_012193_020--Hb_183366_010 Hb_163115_010 Hb_163115_010 Hb_012193_020--Hb_163115_010 Hb_000284_070 Hb_000284_070 Hb_012193_020--Hb_000284_070 Hb_087999_010 Hb_087999_010 Hb_009078_040--Hb_087999_010 Hb_000093_070 Hb_000093_070 Hb_009078_040--Hb_000093_070 Hb_132840_040 Hb_132840_040 Hb_009078_040--Hb_132840_040 Hb_156850_010 Hb_156850_010 Hb_009078_040--Hb_156850_010 Hb_009078_040--Hb_004324_170 Hb_009078_040--Hb_007545_040 Hb_000608_130 Hb_000608_130 Hb_000080_050--Hb_000608_130 Hb_004297_060 Hb_004297_060 Hb_000080_050--Hb_004297_060 Hb_148908_020 Hb_148908_020 Hb_000080_050--Hb_148908_020 Hb_007713_020 Hb_007713_020 Hb_000080_050--Hb_007713_020 Hb_000345_470 Hb_000345_470 Hb_000080_050--Hb_000345_470 Hb_012522_020 Hb_012522_020 Hb_000080_050--Hb_012522_020 Hb_049901_010--Hb_034454_020 Hb_000425_050 Hb_000425_050 Hb_049901_010--Hb_000425_050 Hb_009563_020 Hb_009563_020 Hb_049901_010--Hb_009563_020 Hb_007287_020 Hb_007287_020 Hb_049901_010--Hb_007287_020 Hb_001147_100 Hb_001147_100 Hb_049901_010--Hb_001147_100 Hb_004800_040 Hb_004800_040 Hb_049901_010--Hb_004800_040 Hb_034454_020--Hb_000425_050 Hb_034454_020--Hb_009563_020 Hb_034454_020--Hb_007287_020 Hb_034454_020--Hb_001147_100 Hb_034454_020--Hb_004800_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0670402 0 0 0.0723578
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.37681 0 0 0.0630637 0

CAGE analysis