Hb_004532_010

Information

Type -
Description -
Location Contig4532: 33077-37198
Sequence    

Annotation

kegg
ID sot:102581016
description uncharacterized LOC102581016
nr
ID XP_012487745.1
description PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A0B0MB82
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gossypium arboreum GN=F383_31199 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004532_010 0.0 - - PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
2 Hb_000599_060 0.0276791383 - - PREDICTED: legumin A-like [Jatropha curcas]
3 Hb_001809_040 0.0447788142 - - PREDICTED: uncharacterized protein LOC105638660 [Jatropha curcas]
4 Hb_183366_010 0.0582501905 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
5 Hb_012193_020 0.07808299 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
6 Hb_163115_010 0.1002506981 - - -
7 Hb_027014_010 0.1397397761 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
8 Hb_004162_300 0.1475636935 - - monovalent cation:proton antiporter, putative [Ricinus communis]
9 Hb_034050_010 0.2137012229 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
10 Hb_121031_010 0.2241206379 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
11 Hb_000284_070 0.2449941938 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
12 Hb_000875_100 0.2839364721 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
13 Hb_007761_050 0.3107899009 - - calcineurin-like protein [Hevea brasiliensis]
14 Hb_007192_110 0.3217112044 - - -
15 Hb_037271_010 0.3275508143 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
16 Hb_011401_010 0.3475296088 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
17 Hb_046707_010 0.349107385 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
18 Hb_124480_010 0.3558968867 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
19 Hb_002231_050 0.3564339844 - - -
20 Hb_001080_110 0.3675127306 - - -

Gene co-expression network

sample Hb_004532_010 Hb_004532_010 Hb_000599_060 Hb_000599_060 Hb_004532_010--Hb_000599_060 Hb_001809_040 Hb_001809_040 Hb_004532_010--Hb_001809_040 Hb_183366_010 Hb_183366_010 Hb_004532_010--Hb_183366_010 Hb_012193_020 Hb_012193_020 Hb_004532_010--Hb_012193_020 Hb_163115_010 Hb_163115_010 Hb_004532_010--Hb_163115_010 Hb_027014_010 Hb_027014_010 Hb_004532_010--Hb_027014_010 Hb_000599_060--Hb_001809_040 Hb_000599_060--Hb_183366_010 Hb_000599_060--Hb_163115_010 Hb_000599_060--Hb_012193_020 Hb_000599_060--Hb_027014_010 Hb_001809_040--Hb_183366_010 Hb_001809_040--Hb_163115_010 Hb_001809_040--Hb_027014_010 Hb_004162_300 Hb_004162_300 Hb_001809_040--Hb_004162_300 Hb_183366_010--Hb_163115_010 Hb_183366_010--Hb_027014_010 Hb_183366_010--Hb_004162_300 Hb_012193_020--Hb_001809_040 Hb_012193_020--Hb_183366_010 Hb_012193_020--Hb_163115_010 Hb_000284_070 Hb_000284_070 Hb_012193_020--Hb_000284_070 Hb_163115_010--Hb_027014_010 Hb_163115_010--Hb_004162_300 Hb_027014_010--Hb_004162_300 Hb_034050_010 Hb_034050_010 Hb_027014_010--Hb_034050_010 Hb_121031_010 Hb_121031_010 Hb_027014_010--Hb_121031_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0305906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0796383 0 0 0 0

CAGE analysis