Hb_121031_010

Information

Type -
Description -
Location Contig121031: 2914-3411
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_009611416.1
description PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID M1DR77
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400042649 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121031_010 0.0 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
2 Hb_034050_010 0.0106001795 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
3 Hb_000875_100 0.0611759652 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
4 Hb_004162_300 0.0774965236 - - monovalent cation:proton antiporter, putative [Ricinus communis]
5 Hb_027014_010 0.0853650508 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
6 Hb_163115_010 0.1249274931 - - -
7 Hb_183366_010 0.1667142762 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
8 Hb_001809_040 0.1800494358 - - PREDICTED: uncharacterized protein LOC105638660 [Jatropha curcas]
9 Hb_001014_200 0.1959492987 - - -
10 Hb_000599_060 0.1969262854 - - PREDICTED: legumin A-like [Jatropha curcas]
11 Hb_004532_010 0.2241206379 - - PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
12 Hb_046707_010 0.2520539076 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
13 Hb_110486_010 0.2610066961 - - -
14 Hb_037271_010 0.2804327795 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
15 Hb_011537_120 0.296123386 - - -
16 Hb_012193_020 0.2999124468 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
17 Hb_007192_110 0.3036407638 - - -
18 Hb_003304_040 0.304751808 - - hypothetical protein CICLE_v10003343mg, partial [Citrus clementina]
19 Hb_124480_010 0.3233734587 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
20 Hb_106159_010 0.3245867874 - - -

Gene co-expression network

sample Hb_121031_010 Hb_121031_010 Hb_034050_010 Hb_034050_010 Hb_121031_010--Hb_034050_010 Hb_000875_100 Hb_000875_100 Hb_121031_010--Hb_000875_100 Hb_004162_300 Hb_004162_300 Hb_121031_010--Hb_004162_300 Hb_027014_010 Hb_027014_010 Hb_121031_010--Hb_027014_010 Hb_163115_010 Hb_163115_010 Hb_121031_010--Hb_163115_010 Hb_183366_010 Hb_183366_010 Hb_121031_010--Hb_183366_010 Hb_034050_010--Hb_004162_300 Hb_034050_010--Hb_000875_100 Hb_034050_010--Hb_027014_010 Hb_034050_010--Hb_163115_010 Hb_034050_010--Hb_183366_010 Hb_001014_200 Hb_001014_200 Hb_000875_100--Hb_001014_200 Hb_000875_100--Hb_004162_300 Hb_000875_100--Hb_027014_010 Hb_000875_100--Hb_163115_010 Hb_004162_300--Hb_027014_010 Hb_004162_300--Hb_163115_010 Hb_004162_300--Hb_183366_010 Hb_001809_040 Hb_001809_040 Hb_004162_300--Hb_001809_040 Hb_027014_010--Hb_163115_010 Hb_027014_010--Hb_183366_010 Hb_027014_010--Hb_001809_040 Hb_163115_010--Hb_183366_010 Hb_163115_010--Hb_001809_040 Hb_000599_060 Hb_000599_060 Hb_163115_010--Hb_000599_060 Hb_004532_010 Hb_004532_010 Hb_163115_010--Hb_004532_010 Hb_183366_010--Hb_001809_040 Hb_183366_010--Hb_000599_060 Hb_183366_010--Hb_004532_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.167007
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.14517 0 0 0 0

CAGE analysis