Hb_001014_200

Information

Type -
Description -
Location Contig1014: 165492-167326
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00717: 161940-165060
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_200 0.0 - - -
2 Hb_000875_100 0.1354237601 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
3 Hb_011537_120 0.1885421261 - - -
4 Hb_121031_010 0.1959492987 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
5 Hb_033883_050 0.2019328378 - - -
6 Hb_034050_010 0.2063865909 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
7 Hb_110486_010 0.2129364335 - - -
8 Hb_179447_010 0.2427029179 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
9 Hb_004162_300 0.2719359912 - - monovalent cation:proton antiporter, putative [Ricinus communis]
10 Hb_001377_440 0.2772186411 - - -
11 Hb_027014_010 0.2796107978 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
12 Hb_169488_010 0.2858518351 - - PREDICTED: choline monooxygenase, chloroplastic-like [Populus euphratica]
13 Hb_003702_050 0.291341847 - - PREDICTED: uncharacterized protein LOC105649649 [Jatropha curcas]
14 Hb_046707_010 0.2994165117 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
15 Hb_174005_010 0.3020854765 - - hypothetical protein EUGRSUZ_D00590 [Eucalyptus grandis]
16 Hb_001544_020 0.3081298668 - - -
17 Hb_086287_020 0.3151773338 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Jatropha curcas]
18 Hb_000003_690 0.3175896367 - - -
19 Hb_163115_010 0.3180882078 - - -
20 Hb_000906_050 0.3285997941 - - -

Gene co-expression network

sample Hb_001014_200 Hb_001014_200 Hb_000875_100 Hb_000875_100 Hb_001014_200--Hb_000875_100 Hb_011537_120 Hb_011537_120 Hb_001014_200--Hb_011537_120 Hb_121031_010 Hb_121031_010 Hb_001014_200--Hb_121031_010 Hb_033883_050 Hb_033883_050 Hb_001014_200--Hb_033883_050 Hb_034050_010 Hb_034050_010 Hb_001014_200--Hb_034050_010 Hb_110486_010 Hb_110486_010 Hb_001014_200--Hb_110486_010 Hb_000875_100--Hb_121031_010 Hb_000875_100--Hb_034050_010 Hb_004162_300 Hb_004162_300 Hb_000875_100--Hb_004162_300 Hb_027014_010 Hb_027014_010 Hb_000875_100--Hb_027014_010 Hb_163115_010 Hb_163115_010 Hb_000875_100--Hb_163115_010 Hb_086287_020 Hb_086287_020 Hb_011537_120--Hb_086287_020 Hb_011537_120--Hb_000875_100 Hb_011537_120--Hb_033883_050 Hb_000003_690 Hb_000003_690 Hb_011537_120--Hb_000003_690 Hb_011537_120--Hb_110486_010 Hb_121031_010--Hb_034050_010 Hb_121031_010--Hb_004162_300 Hb_121031_010--Hb_027014_010 Hb_121031_010--Hb_163115_010 Hb_183366_010 Hb_183366_010 Hb_121031_010--Hb_183366_010 Hb_033883_050--Hb_110486_010 Hb_174005_010 Hb_174005_010 Hb_033883_050--Hb_174005_010 Hb_000906_050 Hb_000906_050 Hb_033883_050--Hb_000906_050 Hb_053582_010 Hb_053582_010 Hb_033883_050--Hb_053582_010 Hb_034050_010--Hb_004162_300 Hb_034050_010--Hb_027014_010 Hb_034050_010--Hb_163115_010 Hb_034050_010--Hb_183366_010 Hb_046707_010 Hb_046707_010 Hb_110486_010--Hb_046707_010 Hb_037271_010 Hb_037271_010 Hb_110486_010--Hb_037271_010 Hb_110486_010--Hb_000875_100 Hb_110486_010--Hb_121031_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 6.46985
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.10566 0 0 0 0

CAGE analysis