Hb_034050_010

Information

Type -
Description -
Location Contig34050: 55-630
Sequence    

Annotation

kegg
ID cmo:103498182
description uncharacterized LOC103498182
nr
ID XP_008458920.1
description PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
swissprot
ID -
description -
trembl
ID W9QKF9
description Uncharacterized protein OS=Morus notabilis GN=L484_019698 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034050_010 0.0 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
2 Hb_121031_010 0.0106001795 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
3 Hb_004162_300 0.066915397 - - monovalent cation:proton antiporter, putative [Ricinus communis]
4 Hb_000875_100 0.0717596246 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
5 Hb_027014_010 0.0747883299 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
6 Hb_163115_010 0.1143799625 - - -
7 Hb_183366_010 0.15621074 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
8 Hb_001809_040 0.169562914 - - PREDICTED: uncharacterized protein LOC105638660 [Jatropha curcas]
9 Hb_000599_060 0.1864634486 - - PREDICTED: legumin A-like [Jatropha curcas]
10 Hb_001014_200 0.2063865909 - - -
11 Hb_004532_010 0.2137012229 - - PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
12 Hb_046707_010 0.2533331556 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
13 Hb_110486_010 0.2672326344 - - -
14 Hb_037271_010 0.2791018952 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
15 Hb_012193_020 0.2896517066 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
16 Hb_007192_110 0.3010909622 - - -
17 Hb_011537_120 0.3041519564 - - -
18 Hb_003304_040 0.3049203668 - - hypothetical protein CICLE_v10003343mg, partial [Citrus clementina]
19 Hb_124480_010 0.3218278869 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
20 Hb_106159_010 0.3270202138 - - -

Gene co-expression network

sample Hb_034050_010 Hb_034050_010 Hb_121031_010 Hb_121031_010 Hb_034050_010--Hb_121031_010 Hb_004162_300 Hb_004162_300 Hb_034050_010--Hb_004162_300 Hb_000875_100 Hb_000875_100 Hb_034050_010--Hb_000875_100 Hb_027014_010 Hb_027014_010 Hb_034050_010--Hb_027014_010 Hb_163115_010 Hb_163115_010 Hb_034050_010--Hb_163115_010 Hb_183366_010 Hb_183366_010 Hb_034050_010--Hb_183366_010 Hb_121031_010--Hb_000875_100 Hb_121031_010--Hb_004162_300 Hb_121031_010--Hb_027014_010 Hb_121031_010--Hb_163115_010 Hb_121031_010--Hb_183366_010 Hb_004162_300--Hb_027014_010 Hb_004162_300--Hb_163115_010 Hb_004162_300--Hb_183366_010 Hb_001809_040 Hb_001809_040 Hb_004162_300--Hb_001809_040 Hb_001014_200 Hb_001014_200 Hb_000875_100--Hb_001014_200 Hb_000875_100--Hb_004162_300 Hb_000875_100--Hb_027014_010 Hb_000875_100--Hb_163115_010 Hb_027014_010--Hb_163115_010 Hb_027014_010--Hb_183366_010 Hb_027014_010--Hb_001809_040 Hb_163115_010--Hb_183366_010 Hb_163115_010--Hb_001809_040 Hb_000599_060 Hb_000599_060 Hb_163115_010--Hb_000599_060 Hb_004532_010 Hb_004532_010 Hb_163115_010--Hb_004532_010 Hb_183366_010--Hb_001809_040 Hb_183366_010--Hb_000599_060 Hb_183366_010--Hb_004532_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.198919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.181776 0 0 0 0

CAGE analysis