Hb_000345_470

Information

Type -
Description -
Location Contig345: 379455-382264
Sequence    

Annotation

kegg
ID cic:CICLE_v10000664mg
description hypothetical protein
nr
ID XP_012089446.1
description PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
swissprot
ID F4HZC3
description Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis thaliana GN=GUX5 PE=2 SV=1
trembl
ID V4TAB3
description Hexosyltransferase OS=Citrus clementina GN=CICLE_v10000664mg PE=3 SV=1
Gene Ontology
ID GO:0005794
description udp-glucuronate:xylan alpha-glucuronosyltransferase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000345_470 0.0 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
2 Hb_002461_050 0.1675090969 - - -
3 Hb_126508_010 0.2161654395 - - -
4 Hb_034243_030 0.2640281651 - - B3 domain-containing protein [Medicago truncatula]
5 Hb_002099_020 0.2804294175 - - cysteine proteinase inhibitor-like [Jatropha curcas]
6 Hb_000205_170 0.2805207214 - - PREDICTED: uncharacterized protein LOC103926801 [Pyrus x bretschneideri]
7 Hb_003058_050 0.2805666172 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_011037_010 0.2806630836 - - PREDICTED: uncharacterized protein LOC105778976 [Gossypium raimondii]
9 Hb_003992_010 0.2882536063 - - -
10 Hb_001135_230 0.2993199698 - - PREDICTED: protein REVEILLE 6-like isoform X3 [Gossypium raimondii]
11 Hb_092027_010 0.3033259182 - - PREDICTED: uncharacterized protein LOC105761643 [Gossypium raimondii]
12 Hb_076693_010 0.3035522055 - - PREDICTED: beta-glucosidase 11-like isoform X2 [Jatropha curcas]
13 Hb_011707_010 0.3036243027 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_105061_010 0.3154845926 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
15 Hb_008031_020 0.3214735692 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
16 Hb_001831_020 0.3217140703 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
17 Hb_000058_220 0.3221692149 - - hypothetical protein, partial [Staphylococcus aureus]
18 Hb_019677_010 0.3223227289 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
19 Hb_048125_010 0.3239483912 - - PREDICTED: uncharacterized protein LOC104104928 [Nicotiana tomentosiformis]
20 Hb_012522_020 0.3252707447 - - -

Gene co-expression network

sample Hb_000345_470 Hb_000345_470 Hb_002461_050 Hb_002461_050 Hb_000345_470--Hb_002461_050 Hb_126508_010 Hb_126508_010 Hb_000345_470--Hb_126508_010 Hb_034243_030 Hb_034243_030 Hb_000345_470--Hb_034243_030 Hb_002099_020 Hb_002099_020 Hb_000345_470--Hb_002099_020 Hb_000205_170 Hb_000205_170 Hb_000345_470--Hb_000205_170 Hb_003058_050 Hb_003058_050 Hb_000345_470--Hb_003058_050 Hb_003992_010 Hb_003992_010 Hb_002461_050--Hb_003992_010 Hb_002461_050--Hb_126508_010 Hb_002461_050--Hb_034243_030 Hb_015183_040 Hb_015183_040 Hb_002461_050--Hb_015183_040 Hb_105061_010 Hb_105061_010 Hb_002461_050--Hb_105061_010 Hb_126508_010--Hb_003992_010 Hb_126508_010--Hb_105061_010 Hb_126508_010--Hb_034243_030 Hb_000274_030 Hb_000274_030 Hb_126508_010--Hb_000274_030 Hb_034243_030--Hb_003992_010 Hb_034243_030--Hb_015183_040 Hb_001999_270 Hb_001999_270 Hb_034243_030--Hb_001999_270 Hb_002099_020--Hb_003058_050 Hb_011037_010 Hb_011037_010 Hb_002099_020--Hb_011037_010 Hb_002099_020--Hb_000205_170 Hb_092027_010 Hb_092027_010 Hb_002099_020--Hb_092027_010 Hb_076693_010 Hb_076693_010 Hb_002099_020--Hb_076693_010 Hb_011707_010 Hb_011707_010 Hb_002099_020--Hb_011707_010 Hb_000205_170--Hb_003058_050 Hb_000205_170--Hb_011037_010 Hb_001135_230 Hb_001135_230 Hb_000205_170--Hb_001135_230 Hb_000205_170--Hb_092027_010 Hb_000205_170--Hb_076693_010 Hb_003058_050--Hb_011037_010 Hb_003058_050--Hb_092027_010 Hb_003058_050--Hb_076693_010 Hb_003058_050--Hb_011707_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0267071 0 0.00933611 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0271093 0 0 0 0

CAGE analysis