Hb_002461_050

Information

Type -
Description -
Location Contig2461: 59116-59929
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002461_050 0.0 - - -
2 Hb_003992_010 0.1389372493 - - -
3 Hb_126508_010 0.1427020918 - - -
4 Hb_000345_470 0.1675090969 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
5 Hb_034243_030 0.1696497937 - - B3 domain-containing protein [Medicago truncatula]
6 Hb_015183_040 0.2734969605 - - -
7 Hb_105061_010 0.275252622 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
8 Hb_001999_270 0.3727481624 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
9 Hb_000964_160 0.3896480685 - - PREDICTED: uncharacterized protein LOC102617979 isoform X2 [Citrus sinensis]
10 Hb_007245_010 0.3897070212 - - PREDICTED: uncharacterized protein LOC104783698 [Camelina sativa]
11 Hb_043295_010 0.3897091426 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
12 Hb_002545_030 0.3909418081 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_000441_010 0.3913410609 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
14 Hb_014720_060 0.39140411 - - hypothetical protein JCGZ_11469 [Jatropha curcas]
15 Hb_131101_010 0.3929955104 - - -
16 Hb_001761_110 0.3935411463 - - Contains similarity to Cf-2.2 gene gb
17 Hb_001135_230 0.3960591012 - - PREDICTED: protein REVEILLE 6-like isoform X3 [Gossypium raimondii]
18 Hb_000205_170 0.4033323357 - - PREDICTED: uncharacterized protein LOC103926801 [Pyrus x bretschneideri]
19 Hb_174245_020 0.4055124215 - - -
20 Hb_001959_230 0.4111169846 - - PREDICTED: uncharacterized protein LOC105638436 [Jatropha curcas]

Gene co-expression network

sample Hb_002461_050 Hb_002461_050 Hb_003992_010 Hb_003992_010 Hb_002461_050--Hb_003992_010 Hb_126508_010 Hb_126508_010 Hb_002461_050--Hb_126508_010 Hb_000345_470 Hb_000345_470 Hb_002461_050--Hb_000345_470 Hb_034243_030 Hb_034243_030 Hb_002461_050--Hb_034243_030 Hb_015183_040 Hb_015183_040 Hb_002461_050--Hb_015183_040 Hb_105061_010 Hb_105061_010 Hb_002461_050--Hb_105061_010 Hb_003992_010--Hb_034243_030 Hb_003992_010--Hb_015183_040 Hb_003992_010--Hb_126508_010 Hb_003992_010--Hb_000345_470 Hb_003992_010--Hb_105061_010 Hb_126508_010--Hb_000345_470 Hb_126508_010--Hb_105061_010 Hb_126508_010--Hb_034243_030 Hb_000274_030 Hb_000274_030 Hb_126508_010--Hb_000274_030 Hb_000345_470--Hb_034243_030 Hb_002099_020 Hb_002099_020 Hb_000345_470--Hb_002099_020 Hb_000205_170 Hb_000205_170 Hb_000345_470--Hb_000205_170 Hb_003058_050 Hb_003058_050 Hb_000345_470--Hb_003058_050 Hb_034243_030--Hb_015183_040 Hb_001999_270 Hb_001999_270 Hb_034243_030--Hb_001999_270 Hb_015183_040--Hb_001999_270 Hb_004491_020 Hb_004491_020 Hb_015183_040--Hb_004491_020 Hb_000264_150 Hb_000264_150 Hb_015183_040--Hb_000264_150 Hb_105061_010--Hb_001999_270 Hb_004413_040 Hb_004413_040 Hb_105061_010--Hb_004413_040 Hb_105061_010--Hb_000345_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.209197 0 0.131287 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.127509 0 0 0 0

CAGE analysis