Hb_005694_070

Information

Type -
Description -
Location Contig5694: 50139-56841
Sequence    

Annotation

kegg
ID rcu:RCOM_0716010
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002523302.1
description kinase, putative [Ricinus communis]
swissprot
ID Q6EU49
description Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1
trembl
ID B9SBD3
description Kinase, putative OS=Ricinus communis GN=RCOM_0716010 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase wnk4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005694_070 0.0 - - kinase, putative [Ricinus communis]
2 Hb_005686_100 0.1556168922 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004586_310 0.1713294819 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001007_090 0.2316293161 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Jatropha curcas]
5 Hb_000521_190 0.2358905699 desease resistance Gene Name: TIR hypothetical protein JCGZ_25500 [Jatropha curcas]
6 Hb_123475_020 0.2362477656 - - -
7 Hb_059481_010 0.2370263884 - - hypothetical protein POPTR_0008s06860g [Populus trichocarpa]
8 Hb_000653_020 0.2386753024 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
9 Hb_114292_010 0.239381771 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004449_140 0.2416312309 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
11 Hb_000170_080 0.2501431889 - - PREDICTED: probable calcium-binding protein CML44 [Jatropha curcas]
12 Hb_002307_040 0.2530811397 - - DNA binding protein, putative [Ricinus communis]
13 Hb_176472_020 0.2573820784 - - conserved hypothetical protein [Ricinus communis]
14 Hb_183719_010 0.2577791347 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
15 Hb_000866_430 0.2611705503 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB6 [Jatropha curcas]
16 Hb_116420_050 0.2619324187 - - PREDICTED: ACT domain-containing protein ACR1 [Jatropha curcas]
17 Hb_000069_250 0.2662575455 - - hypothetical protein JCGZ_14250 [Jatropha curcas]
18 Hb_001935_040 0.2680473292 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 8 [Jatropha curcas]
19 Hb_000577_050 0.268892017 - - -
20 Hb_000042_020 0.2714124551 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_005694_070 Hb_005694_070 Hb_005686_100 Hb_005686_100 Hb_005694_070--Hb_005686_100 Hb_004586_310 Hb_004586_310 Hb_005694_070--Hb_004586_310 Hb_001007_090 Hb_001007_090 Hb_005694_070--Hb_001007_090 Hb_000521_190 Hb_000521_190 Hb_005694_070--Hb_000521_190 Hb_123475_020 Hb_123475_020 Hb_005694_070--Hb_123475_020 Hb_059481_010 Hb_059481_010 Hb_005694_070--Hb_059481_010 Hb_005686_100--Hb_004586_310 Hb_002307_040 Hb_002307_040 Hb_005686_100--Hb_002307_040 Hb_000069_250 Hb_000069_250 Hb_005686_100--Hb_000069_250 Hb_114292_010 Hb_114292_010 Hb_005686_100--Hb_114292_010 Hb_003762_010 Hb_003762_010 Hb_005686_100--Hb_003762_010 Hb_004586_310--Hb_114292_010 Hb_004586_310--Hb_001007_090 Hb_001143_200 Hb_001143_200 Hb_004586_310--Hb_001143_200 Hb_002221_010 Hb_002221_010 Hb_004586_310--Hb_002221_010 Hb_008878_010 Hb_008878_010 Hb_001007_090--Hb_008878_010 Hb_001007_090--Hb_000521_190 Hb_000134_260 Hb_000134_260 Hb_001007_090--Hb_000134_260 Hb_176472_020 Hb_176472_020 Hb_001007_090--Hb_176472_020 Hb_000866_430 Hb_000866_430 Hb_001007_090--Hb_000866_430 Hb_116420_050 Hb_116420_050 Hb_001007_090--Hb_116420_050 Hb_000521_190--Hb_176472_020 Hb_000521_190--Hb_000866_430 Hb_000521_190--Hb_004586_310 Hb_002151_130 Hb_002151_130 Hb_000521_190--Hb_002151_130 Hb_000521_190--Hb_116420_050 Hb_002874_210 Hb_002874_210 Hb_123475_020--Hb_002874_210 Hb_034310_010 Hb_034310_010 Hb_123475_020--Hb_034310_010 Hb_028639_040 Hb_028639_040 Hb_123475_020--Hb_028639_040 Hb_004495_010 Hb_004495_010 Hb_123475_020--Hb_004495_010 Hb_107174_010 Hb_107174_010 Hb_123475_020--Hb_107174_010 Hb_123475_020--Hb_005686_100 Hb_059481_010--Hb_002874_210 Hb_059481_010--Hb_001007_090 Hb_059481_010--Hb_123475_020 Hb_000042_020 Hb_000042_020 Hb_059481_010--Hb_000042_020 Hb_002447_160 Hb_002447_160 Hb_059481_010--Hb_002447_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0723391 0.284462 1.35965 0.0914132 0.0136161 0.0823659
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0331365 0.0782058 0 0 0

CAGE analysis