Hb_000069_250

Information

Type -
Description -
Location Contig69: 296442-298461
Sequence    

Annotation

kegg
ID pop:POPTR_0002s17290g
description POPTRDRAFT_409488; zinc knuckle family protein
nr
ID KDP28479.1
description hypothetical protein JCGZ_14250 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9I4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14250 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_250 0.0 - - hypothetical protein JCGZ_14250 [Jatropha curcas]
2 Hb_010578_020 0.1324087104 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_009554_020 0.1476400839 - - PREDICTED: em-like protein GEA6 [Sesamum indicum]
4 Hb_001433_120 0.1477205594 - - hypothetical protein CICLE_v10003574mg, partial [Citrus clementina]
5 Hb_005015_040 0.1497535858 transcription factor TF Family: FAR1 PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Nicotiana sylvestris]
6 Hb_136620_010 0.1499269164 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
7 Hb_000280_100 0.1551271276 - - hypothetical protein JCGZ_13378 [Jatropha curcas]
8 Hb_012633_010 0.156905315 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
9 Hb_000165_270 0.1635045454 transcription factor TF Family: Tify JAZ10 [Hevea brasiliensis]
10 Hb_002435_010 0.1662443305 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
11 Hb_000206_080 0.1678493009 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
12 Hb_001143_200 0.1681668851 transcription factor TF Family: NAC NAC domain protein [Glycine max]
13 Hb_002534_040 0.1682262789 - - Calmodulin, putative [Ricinus communis]
14 Hb_008453_120 0.1704662024 transcription factor TF Family: bZIP hypothetical protein POPTR_0005s26480g [Populus trichocarpa]
15 Hb_004724_250 0.1720681638 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
16 Hb_007970_030 0.176235452 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
17 Hb_002447_060 0.1765403274 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
18 Hb_182291_020 0.1779237563 - - hypothetical protein CICLE_v10029871mg [Citrus clementina]
19 Hb_052764_120 0.1784625315 - - PREDICTED: uncharacterized protein LOC103941142 [Pyrus x bretschneideri]
20 Hb_148146_030 0.1788510655 - - PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]

Gene co-expression network

sample Hb_000069_250 Hb_000069_250 Hb_010578_020 Hb_010578_020 Hb_000069_250--Hb_010578_020 Hb_009554_020 Hb_009554_020 Hb_000069_250--Hb_009554_020 Hb_001433_120 Hb_001433_120 Hb_000069_250--Hb_001433_120 Hb_005015_040 Hb_005015_040 Hb_000069_250--Hb_005015_040 Hb_136620_010 Hb_136620_010 Hb_000069_250--Hb_136620_010 Hb_000280_100 Hb_000280_100 Hb_000069_250--Hb_000280_100 Hb_052764_120 Hb_052764_120 Hb_010578_020--Hb_052764_120 Hb_004724_250 Hb_004724_250 Hb_010578_020--Hb_004724_250 Hb_002435_010 Hb_002435_010 Hb_010578_020--Hb_002435_010 Hb_048141_060 Hb_048141_060 Hb_010578_020--Hb_048141_060 Hb_002267_010 Hb_002267_010 Hb_010578_020--Hb_002267_010 Hb_000164_030 Hb_000164_030 Hb_010578_020--Hb_000164_030 Hb_009554_020--Hb_005015_040 Hb_007970_030 Hb_007970_030 Hb_009554_020--Hb_007970_030 Hb_182291_020 Hb_182291_020 Hb_009554_020--Hb_182291_020 Hb_000116_340 Hb_000116_340 Hb_009554_020--Hb_000116_340 Hb_003767_020 Hb_003767_020 Hb_009554_020--Hb_003767_020 Hb_000160_340 Hb_000160_340 Hb_009554_020--Hb_000160_340 Hb_000165_270 Hb_000165_270 Hb_001433_120--Hb_000165_270 Hb_007218_010 Hb_007218_010 Hb_001433_120--Hb_007218_010 Hb_005854_060 Hb_005854_060 Hb_001433_120--Hb_005854_060 Hb_007157_050 Hb_007157_050 Hb_001433_120--Hb_007157_050 Hb_001680_060 Hb_001680_060 Hb_001433_120--Hb_001680_060 Hb_002447_060 Hb_002447_060 Hb_001433_120--Hb_002447_060 Hb_148146_030 Hb_148146_030 Hb_005015_040--Hb_148146_030 Hb_005015_040--Hb_136620_010 Hb_005015_040--Hb_007970_030 Hb_005015_040--Hb_182291_020 Hb_000206_080 Hb_000206_080 Hb_005015_040--Hb_000206_080 Hb_136620_010--Hb_000206_080 Hb_003411_080 Hb_003411_080 Hb_136620_010--Hb_003411_080 Hb_002028_230 Hb_002028_230 Hb_136620_010--Hb_002028_230 Hb_136620_010--Hb_005854_060 Hb_136620_010--Hb_001433_120 Hb_149407_010 Hb_149407_010 Hb_136620_010--Hb_149407_010 Hb_001143_200 Hb_001143_200 Hb_000280_100--Hb_001143_200 Hb_012633_010 Hb_012633_010 Hb_000280_100--Hb_012633_010 Hb_000042_020 Hb_000042_020 Hb_000280_100--Hb_000042_020 Hb_000280_100--Hb_002435_010 Hb_003935_050 Hb_003935_050 Hb_000280_100--Hb_003935_050 Hb_027065_010 Hb_027065_010 Hb_000280_100--Hb_027065_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0265628 1.89592 17.4097 0.431643 0.0249089 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0610101 0.0959536 0 0.0968532 0.0970085

CAGE analysis