Hb_148146_030

Information

Type -
Description -
Location Contig148146: 14569-15624
Sequence    

Annotation

kegg
ID rcu:RCOM_0902780
description hypothetical protein
nr
ID XP_012091256.1
description PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JA80
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21147 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148146_030 0.0 - - PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]
2 Hb_005015_040 0.1185582412 transcription factor TF Family: FAR1 PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Nicotiana sylvestris]
3 Hb_005348_130 0.1288556405 - - PREDICTED: pollen receptor-like kinase 3 [Jatropha curcas]
4 Hb_009554_020 0.1330410508 - - PREDICTED: em-like protein GEA6 [Sesamum indicum]
5 Hb_136620_010 0.1771336077 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
6 Hb_007970_030 0.1778219663 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
7 Hb_000069_250 0.1788510655 - - hypothetical protein JCGZ_14250 [Jatropha curcas]
8 Hb_182291_020 0.1800141496 - - hypothetical protein CICLE_v10029871mg [Citrus clementina]
9 Hb_000116_340 0.1825579888 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
10 Hb_000206_080 0.1883104198 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
11 Hb_000375_270 0.195890243 - - -
12 Hb_003767_020 0.2010739153 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
13 Hb_162304_010 0.2061230035 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003762_010 0.2067756458 - - -
15 Hb_000160_340 0.2081398003 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
16 Hb_010578_020 0.2179835688 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_002893_140 0.2208341358 - - Glycine-rich cell wall structural protein precursor, putative [Ricinus communis]
18 Hb_003411_080 0.2209902974 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000172_500 0.2249301623 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008453_120 0.2264070722 transcription factor TF Family: bZIP hypothetical protein POPTR_0005s26480g [Populus trichocarpa]

Gene co-expression network

sample Hb_148146_030 Hb_148146_030 Hb_005015_040 Hb_005015_040 Hb_148146_030--Hb_005015_040 Hb_005348_130 Hb_005348_130 Hb_148146_030--Hb_005348_130 Hb_009554_020 Hb_009554_020 Hb_148146_030--Hb_009554_020 Hb_136620_010 Hb_136620_010 Hb_148146_030--Hb_136620_010 Hb_007970_030 Hb_007970_030 Hb_148146_030--Hb_007970_030 Hb_000069_250 Hb_000069_250 Hb_148146_030--Hb_000069_250 Hb_005015_040--Hb_009554_020 Hb_005015_040--Hb_136620_010 Hb_005015_040--Hb_007970_030 Hb_182291_020 Hb_182291_020 Hb_005015_040--Hb_182291_020 Hb_000206_080 Hb_000206_080 Hb_005015_040--Hb_000206_080 Hb_003762_010 Hb_003762_010 Hb_005348_130--Hb_003762_010 Hb_005348_130--Hb_009554_020 Hb_005348_130--Hb_007970_030 Hb_005348_130--Hb_182291_020 Hb_000116_340 Hb_000116_340 Hb_005348_130--Hb_000116_340 Hb_009554_020--Hb_007970_030 Hb_009554_020--Hb_182291_020 Hb_009554_020--Hb_000116_340 Hb_003767_020 Hb_003767_020 Hb_009554_020--Hb_003767_020 Hb_000160_340 Hb_000160_340 Hb_009554_020--Hb_000160_340 Hb_136620_010--Hb_000206_080 Hb_003411_080 Hb_003411_080 Hb_136620_010--Hb_003411_080 Hb_002028_230 Hb_002028_230 Hb_136620_010--Hb_002028_230 Hb_005854_060 Hb_005854_060 Hb_136620_010--Hb_005854_060 Hb_001433_120 Hb_001433_120 Hb_136620_010--Hb_001433_120 Hb_149407_010 Hb_149407_010 Hb_136620_010--Hb_149407_010 Hb_007970_030--Hb_182291_020 Hb_007970_030--Hb_000116_340 Hb_007970_030--Hb_003767_020 Hb_007970_030--Hb_000160_340 Hb_002893_140 Hb_002893_140 Hb_007970_030--Hb_002893_140 Hb_010578_020 Hb_010578_020 Hb_000069_250--Hb_010578_020 Hb_000069_250--Hb_009554_020 Hb_000069_250--Hb_001433_120 Hb_000069_250--Hb_005015_040 Hb_000069_250--Hb_136620_010 Hb_000280_100 Hb_000280_100 Hb_000069_250--Hb_000280_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0611335 0.739551 0 0.0228794 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis