Hb_003767_020

Information

Type -
Description -
Location Contig3767: 77388-78494
Sequence    

Annotation

kegg
ID fve:101292084
description MLP-like protein 28-like
nr
ID XP_004291554.1
description PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
swissprot
ID Q941R6
description MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2
trembl
ID A0A0A0LA34
description Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003767_020 0.0 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
2 Hb_000160_340 0.0089765836 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_000116_340 0.0243239506 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
4 Hb_002893_140 0.0247895587 - - Glycine-rich cell wall structural protein precursor, putative [Ricinus communis]
5 Hb_182291_020 0.0277809114 - - hypothetical protein CICLE_v10029871mg [Citrus clementina]
6 Hb_007970_030 0.0307875395 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
7 Hb_000073_070 0.050518396 - - -
8 Hb_000495_090 0.0515943207 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
9 Hb_105632_010 0.057621433 - - -
10 Hb_005743_020 0.0576397203 - - -
11 Hb_001274_060 0.0890940916 - - PREDICTED: uncharacterized protein LOC105802656 [Gossypium raimondii]
12 Hb_000380_030 0.0939432678 - - Kiwellin, putative [Ricinus communis]
13 Hb_000787_120 0.0962166532 - - 2S sulfur-rich seed storage protein precursor large subunit, putative [Ricinus communis]
14 Hb_003633_110 0.0973905696 - - hypothetical protein PRUPE_ppa019329mg [Prunus persica]
15 Hb_001459_070 0.1013664775 - - -
16 Hb_009554_020 0.103988627 - - PREDICTED: em-like protein GEA6 [Sesamum indicum]
17 Hb_107725_010 0.1065896316 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
18 Hb_055235_010 0.1283839862 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_028707_060 0.1528673604 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC101308915 [Fragaria vesca subsp. vesca]
20 Hb_006570_130 0.1636842493 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003767_020 Hb_003767_020 Hb_000160_340 Hb_000160_340 Hb_003767_020--Hb_000160_340 Hb_000116_340 Hb_000116_340 Hb_003767_020--Hb_000116_340 Hb_002893_140 Hb_002893_140 Hb_003767_020--Hb_002893_140 Hb_182291_020 Hb_182291_020 Hb_003767_020--Hb_182291_020 Hb_007970_030 Hb_007970_030 Hb_003767_020--Hb_007970_030 Hb_000073_070 Hb_000073_070 Hb_003767_020--Hb_000073_070 Hb_000160_340--Hb_002893_140 Hb_000160_340--Hb_000116_340 Hb_000160_340--Hb_182291_020 Hb_000160_340--Hb_007970_030 Hb_000160_340--Hb_000073_070 Hb_000116_340--Hb_182291_020 Hb_000116_340--Hb_007970_030 Hb_000116_340--Hb_002893_140 Hb_000116_340--Hb_000073_070 Hb_002893_140--Hb_000073_070 Hb_000495_090 Hb_000495_090 Hb_002893_140--Hb_000495_090 Hb_105632_010 Hb_105632_010 Hb_002893_140--Hb_105632_010 Hb_005743_020 Hb_005743_020 Hb_002893_140--Hb_005743_020 Hb_182291_020--Hb_007970_030 Hb_182291_020--Hb_002893_140 Hb_009554_020 Hb_009554_020 Hb_182291_020--Hb_009554_020 Hb_007970_030--Hb_002893_140 Hb_007970_030--Hb_009554_020 Hb_000073_070--Hb_000495_090 Hb_000073_070--Hb_105632_010 Hb_000073_070--Hb_005743_020 Hb_001274_060 Hb_001274_060 Hb_000073_070--Hb_001274_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0670544 0.25377 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis