Hb_187677_010

Information

Type -
Description -
Location Contig187677: 266-901
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187677_010 0.0 - - -
2 Hb_000327_370 0.2340269076 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
3 Hb_000364_190 0.2416364086 - - -
4 Hb_161010_010 0.2612427199 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
5 Hb_012565_040 0.2653275103 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
6 Hb_002659_030 0.2703840589 - - copper transport protein atox1, putative [Ricinus communis]
7 Hb_003878_220 0.2876727193 - - vacuolar protein sorting, putative [Ricinus communis]
8 Hb_000173_440 0.2886784474 - - YALI0B05280p [Yarrowia lipolytica]
9 Hb_007975_050 0.2900776142 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
10 Hb_006153_180 0.2943841045 - - PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X1 [Jatropha curcas]
11 Hb_023827_020 0.3021312468 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
12 Hb_000336_230 0.3025221384 transcription factor TF Family: mTERF hypothetical protein PRUPE_ppa007609mg [Prunus persica]
13 Hb_000115_250 0.3035548853 - - PREDICTED: endonuclease 2 [Jatropha curcas]
14 Hb_002527_050 0.3076562699 - - hypothetical protein JCGZ_20265 [Jatropha curcas]
15 Hb_034507_010 0.3115719594 transcription factor TF Family: MYB MYB transcription factor [Hevea brasiliensis]
16 Hb_005976_010 0.3135337189 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
17 Hb_001033_070 0.3139691975 - - seryl-tRNA synthetase, putative [Ricinus communis]
18 Hb_132840_070 0.3179725369 - - metal tolerance protein 1 [Populus trichocarpa x Populus deltoides]
19 Hb_002170_020 0.3191883968 transcription factor TF Family: MYB MYB transcription factor [Hevea brasiliensis]
20 Hb_000008_060 0.3196316264 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_187677_010 Hb_187677_010 Hb_000327_370 Hb_000327_370 Hb_187677_010--Hb_000327_370 Hb_000364_190 Hb_000364_190 Hb_187677_010--Hb_000364_190 Hb_161010_010 Hb_161010_010 Hb_187677_010--Hb_161010_010 Hb_012565_040 Hb_012565_040 Hb_187677_010--Hb_012565_040 Hb_002659_030 Hb_002659_030 Hb_187677_010--Hb_002659_030 Hb_003878_220 Hb_003878_220 Hb_187677_010--Hb_003878_220 Hb_027010_030 Hb_027010_030 Hb_000327_370--Hb_027010_030 Hb_006153_180 Hb_006153_180 Hb_000327_370--Hb_006153_180 Hb_000245_120 Hb_000245_120 Hb_000327_370--Hb_000245_120 Hb_000115_010 Hb_000115_010 Hb_000327_370--Hb_000115_010 Hb_032718_010 Hb_032718_010 Hb_000327_370--Hb_032718_010 Hb_005306_120 Hb_005306_120 Hb_000364_190--Hb_005306_120 Hb_011947_020 Hb_011947_020 Hb_000364_190--Hb_011947_020 Hb_000849_060 Hb_000849_060 Hb_000364_190--Hb_000849_060 Hb_015778_030 Hb_015778_030 Hb_000364_190--Hb_015778_030 Hb_001989_100 Hb_001989_100 Hb_000364_190--Hb_001989_100 Hb_000008_060 Hb_000008_060 Hb_161010_010--Hb_000008_060 Hb_000700_080 Hb_000700_080 Hb_161010_010--Hb_000700_080 Hb_002527_050 Hb_002527_050 Hb_161010_010--Hb_002527_050 Hb_001616_110 Hb_001616_110 Hb_161010_010--Hb_001616_110 Hb_042202_060 Hb_042202_060 Hb_161010_010--Hb_042202_060 Hb_002291_020 Hb_002291_020 Hb_012565_040--Hb_002291_020 Hb_012565_040--Hb_002527_050 Hb_002170_020 Hb_002170_020 Hb_012565_040--Hb_002170_020 Hb_004657_060 Hb_004657_060 Hb_012565_040--Hb_004657_060 Hb_000181_210 Hb_000181_210 Hb_012565_040--Hb_000181_210 Hb_000059_300 Hb_000059_300 Hb_012565_040--Hb_000059_300 Hb_029920_020 Hb_029920_020 Hb_002659_030--Hb_029920_020 Hb_002320_080 Hb_002320_080 Hb_002659_030--Hb_002320_080 Hb_000389_050 Hb_000389_050 Hb_002659_030--Hb_000389_050 Hb_016564_010 Hb_016564_010 Hb_002659_030--Hb_016564_010 Hb_000336_230 Hb_000336_230 Hb_002659_030--Hb_000336_230 Hb_011472_010 Hb_011472_010 Hb_002659_030--Hb_011472_010 Hb_003878_220--Hb_006153_180 Hb_005976_010 Hb_005976_010 Hb_003878_220--Hb_005976_010 Hb_011861_090 Hb_011861_090 Hb_003878_220--Hb_011861_090 Hb_008790_040 Hb_008790_040 Hb_003878_220--Hb_008790_040 Hb_000077_360 Hb_000077_360 Hb_003878_220--Hb_000077_360 Hb_000115_250 Hb_000115_250 Hb_003878_220--Hb_000115_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0746502 0 0.242547 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0728617 0.128481 0.119131 0.142264

CAGE analysis