Hb_002527_050

Information

Type -
Description -
Location Contig2527: 30927-31466
Sequence    

Annotation

kegg
ID rcu:RCOM_1333080
description hypothetical protein
nr
ID KDP27333.1
description hypothetical protein JCGZ_20265 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JX21
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20265 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002527_050 0.0 - - hypothetical protein JCGZ_20265 [Jatropha curcas]
2 Hb_000649_180 0.155735656 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
3 Hb_012565_040 0.1604060347 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
4 Hb_000011_420 0.1608450863 - - PREDICTED: GDSL esterase/lipase At1g29660-like [Citrus sinensis]
5 Hb_002170_020 0.1662671917 transcription factor TF Family: MYB MYB transcription factor [Hevea brasiliensis]
6 Hb_002291_020 0.1757278803 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
7 Hb_009193_100 0.1854697995 - - hypothetical protein JCGZ_15709 [Jatropha curcas]
8 Hb_152868_030 0.1861065405 - - abhydrolase domain containing, putative [Ricinus communis]
9 Hb_149515_010 0.1941162268 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
10 Hb_028872_150 0.1966935192 - - PREDICTED: uncharacterized protein LOC105137493 [Populus euphratica]
11 Hb_001123_010 0.1999801087 - - conserved hypothetical protein [Ricinus communis]
12 Hb_023827_020 0.2093771371 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
13 Hb_004657_060 0.2121269471 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
14 Hb_177215_030 0.2153280253 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]
15 Hb_074506_010 0.216206678 - - JHL25H03.10 [Jatropha curcas]
16 Hb_004495_020 0.2178075632 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_003044_080 0.2180470877 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
18 Hb_000453_240 0.2189230972 rubber biosynthesis Gene Name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Hevea brasiliensis]
19 Hb_000866_110 0.2203217663 - - PREDICTED: uncharacterized protein LOC105642980 isoform X2 [Jatropha curcas]
20 Hb_011872_020 0.2207095277 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH128 [Jatropha curcas]

Gene co-expression network

sample Hb_002527_050 Hb_002527_050 Hb_000649_180 Hb_000649_180 Hb_002527_050--Hb_000649_180 Hb_012565_040 Hb_012565_040 Hb_002527_050--Hb_012565_040 Hb_000011_420 Hb_000011_420 Hb_002527_050--Hb_000011_420 Hb_002170_020 Hb_002170_020 Hb_002527_050--Hb_002170_020 Hb_002291_020 Hb_002291_020 Hb_002527_050--Hb_002291_020 Hb_009193_100 Hb_009193_100 Hb_002527_050--Hb_009193_100 Hb_000649_180--Hb_002291_020 Hb_149515_010 Hb_149515_010 Hb_000649_180--Hb_149515_010 Hb_008033_060 Hb_008033_060 Hb_000649_180--Hb_008033_060 Hb_000453_130 Hb_000453_130 Hb_000649_180--Hb_000453_130 Hb_001754_260 Hb_001754_260 Hb_000649_180--Hb_001754_260 Hb_012565_040--Hb_002291_020 Hb_012565_040--Hb_002170_020 Hb_004657_060 Hb_004657_060 Hb_012565_040--Hb_004657_060 Hb_000181_210 Hb_000181_210 Hb_012565_040--Hb_000181_210 Hb_000059_300 Hb_000059_300 Hb_012565_040--Hb_000059_300 Hb_002291_010 Hb_002291_010 Hb_000011_420--Hb_002291_010 Hb_000011_420--Hb_149515_010 Hb_000853_060 Hb_000853_060 Hb_000011_420--Hb_000853_060 Hb_028811_010 Hb_028811_010 Hb_000011_420--Hb_028811_010 Hb_011909_010 Hb_011909_010 Hb_000011_420--Hb_011909_010 Hb_009535_030 Hb_009535_030 Hb_002170_020--Hb_009535_030 Hb_005016_010 Hb_005016_010 Hb_002170_020--Hb_005016_010 Hb_000683_050 Hb_000683_050 Hb_002170_020--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_002170_020--Hb_004030_060 Hb_006683_020 Hb_006683_020 Hb_002170_020--Hb_006683_020 Hb_011872_020 Hb_011872_020 Hb_002170_020--Hb_011872_020 Hb_007919_040 Hb_007919_040 Hb_002291_020--Hb_007919_040 Hb_000141_010 Hb_000141_010 Hb_002291_020--Hb_000141_010 Hb_002291_020--Hb_149515_010 Hb_000527_070 Hb_000527_070 Hb_002291_020--Hb_000527_070 Hb_000699_230 Hb_000699_230 Hb_009193_100--Hb_000699_230 Hb_001623_160 Hb_001623_160 Hb_009193_100--Hb_001623_160 Hb_000625_090 Hb_000625_090 Hb_009193_100--Hb_000625_090 Hb_000381_110 Hb_000381_110 Hb_009193_100--Hb_000381_110 Hb_000997_180 Hb_000997_180 Hb_009193_100--Hb_000997_180 Hb_000251_030 Hb_000251_030 Hb_009193_100--Hb_000251_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.26892 9.0645 3.98112 11.1699 0.102471 0.488561
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.30473 2.98233 11.697 20.6706 9.9142

CAGE analysis