Hb_008033_060

Information

Type -
Description -
Location Contig8033: 92804-98235
Sequence    

Annotation

kegg
ID pop:POPTR_0018s02410g
description POPTRDRAFT_578270; hypothetical protein
nr
ID XP_012076441.1
description PREDICTED: uncharacterized protein LOC105637564 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KNY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07095 PE=4 SV=1
Gene Ontology
ID GO:0009987
description nucleic acid binding isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58932: 90283-98010
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008033_060 0.0 - - PREDICTED: uncharacterized protein LOC105637564 [Jatropha curcas]
2 Hb_007951_070 0.1582769219 desease resistance Gene Name: NB-ARC Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_001096_020 0.159409087 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Populus euphratica]
4 Hb_000649_180 0.1769944272 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
5 Hb_007237_010 0.1841346488 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000445_030 0.1843713937 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
7 Hb_000692_110 0.1863958422 - - PREDICTED: NEP1-interacting protein-like 1 [Jatropha curcas]
8 Hb_001141_040 0.1894999747 - - PREDICTED: protein NETWORKED 1A [Jatropha curcas]
9 Hb_000453_130 0.1909157091 - - PREDICTED: protein kinase 2A, chloroplastic-like [Jatropha curcas]
10 Hb_021854_020 0.1933770031 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
11 Hb_008066_080 0.1992115903 - - PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
12 Hb_000465_450 0.2050533802 - - triacylglycerol lipase, putative [Ricinus communis]
13 Hb_013848_030 0.2145324478 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]
14 Hb_005214_080 0.2154709029 - - conserved hypothetical protein [Ricinus communis]
15 Hb_014324_010 0.21706621 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
16 Hb_002909_080 0.2173368706 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
17 Hb_000120_870 0.2218106351 rubber biosynthesis Gene Name: CPT6 -
18 Hb_003640_010 0.2238845802 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
19 Hb_018616_040 0.2262074621 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
20 Hb_006594_080 0.2268083109 - - beta-glucosidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_008033_060 Hb_008033_060 Hb_007951_070 Hb_007951_070 Hb_008033_060--Hb_007951_070 Hb_001096_020 Hb_001096_020 Hb_008033_060--Hb_001096_020 Hb_000649_180 Hb_000649_180 Hb_008033_060--Hb_000649_180 Hb_007237_010 Hb_007237_010 Hb_008033_060--Hb_007237_010 Hb_000445_030 Hb_000445_030 Hb_008033_060--Hb_000445_030 Hb_000692_110 Hb_000692_110 Hb_008033_060--Hb_000692_110 Hb_000120_870 Hb_000120_870 Hb_007951_070--Hb_000120_870 Hb_007951_070--Hb_007237_010 Hb_000116_330 Hb_000116_330 Hb_007951_070--Hb_000116_330 Hb_001141_040 Hb_001141_040 Hb_007951_070--Hb_001141_040 Hb_018616_040 Hb_018616_040 Hb_007951_070--Hb_018616_040 Hb_014324_010 Hb_014324_010 Hb_001096_020--Hb_014324_010 Hb_021854_020 Hb_021854_020 Hb_001096_020--Hb_021854_020 Hb_001096_020--Hb_001141_040 Hb_001085_210 Hb_001085_210 Hb_001096_020--Hb_001085_210 Hb_000054_110 Hb_000054_110 Hb_001096_020--Hb_000054_110 Hb_002291_020 Hb_002291_020 Hb_000649_180--Hb_002291_020 Hb_002527_050 Hb_002527_050 Hb_000649_180--Hb_002527_050 Hb_149515_010 Hb_149515_010 Hb_000649_180--Hb_149515_010 Hb_000453_130 Hb_000453_130 Hb_000649_180--Hb_000453_130 Hb_001754_260 Hb_001754_260 Hb_000649_180--Hb_001754_260 Hb_000959_010 Hb_000959_010 Hb_007237_010--Hb_000959_010 Hb_060198_010 Hb_060198_010 Hb_007237_010--Hb_060198_010 Hb_006040_170 Hb_006040_170 Hb_007237_010--Hb_006040_170 Hb_007237_010--Hb_000120_870 Hb_000465_450 Hb_000465_450 Hb_007237_010--Hb_000465_450 Hb_003640_010 Hb_003640_010 Hb_000445_030--Hb_003640_010 Hb_002622_010 Hb_002622_010 Hb_000445_030--Hb_002622_010 Hb_029576_080 Hb_029576_080 Hb_000445_030--Hb_029576_080 Hb_001660_050 Hb_001660_050 Hb_000445_030--Hb_001660_050 Hb_003085_080 Hb_003085_080 Hb_000445_030--Hb_003085_080 Hb_013848_030 Hb_013848_030 Hb_000445_030--Hb_013848_030 Hb_000616_010 Hb_000616_010 Hb_000692_110--Hb_000616_010 Hb_001189_100 Hb_001189_100 Hb_000692_110--Hb_001189_100 Hb_009554_030 Hb_009554_030 Hb_000692_110--Hb_009554_030 Hb_008066_080 Hb_008066_080 Hb_000692_110--Hb_008066_080 Hb_005766_010 Hb_005766_010 Hb_000692_110--Hb_005766_010 Hb_000594_160 Hb_000594_160 Hb_000692_110--Hb_000594_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.106839 0.08568 0.11709 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0908066 0.22228 0.201612

CAGE analysis