Hb_000364_190

Information

Type -
Description -
Location Contig364: 200352-200926
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37462: 201174-201299
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_190 0.0 - - -
2 Hb_005306_120 0.2006836624 - - conserved hypothetical protein [Ricinus communis]
3 Hb_187677_010 0.2416364086 - - -
4 Hb_011947_020 0.2558511483 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
5 Hb_000849_060 0.265297603 - - putative sodium-dependent transporter yocS [Morus notabilis]
6 Hb_015778_030 0.2682704077 - - PREDICTED: probable myosin light chain kinase DDB_G0279831 [Jatropha curcas]
7 Hb_001989_100 0.2691508968 - - PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
8 Hb_000260_280 0.2702315514 - - auxin:hydrogen symporter, putative [Ricinus communis]
9 Hb_005813_010 0.2729731827 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_032972_010 0.274317102 - - Glycolipid transfer protein, putative [Ricinus communis]
11 Hb_000192_020 0.2745802015 - - hypothetical protein JCGZ_17351 [Jatropha curcas]
12 Hb_030982_060 0.2749933419 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007975_050 0.2793812768 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
14 Hb_023827_020 0.2808480992 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
15 Hb_000754_070 0.2818915724 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000110_290 0.282741346 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000027_210 0.283190601 - - Os01g0689300, partial [Oryza sativa Japonica Group]
18 Hb_012707_010 0.2872483871 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
19 Hb_001486_350 0.288700671 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
20 Hb_001898_140 0.2901490525 - - hypothetical protein AMTR_s00071p00184460 [Amborella trichopoda]

Gene co-expression network

sample Hb_000364_190 Hb_000364_190 Hb_005306_120 Hb_005306_120 Hb_000364_190--Hb_005306_120 Hb_187677_010 Hb_187677_010 Hb_000364_190--Hb_187677_010 Hb_011947_020 Hb_011947_020 Hb_000364_190--Hb_011947_020 Hb_000849_060 Hb_000849_060 Hb_000364_190--Hb_000849_060 Hb_015778_030 Hb_015778_030 Hb_000364_190--Hb_015778_030 Hb_001989_100 Hb_001989_100 Hb_000364_190--Hb_001989_100 Hb_000110_290 Hb_000110_290 Hb_005306_120--Hb_000110_290 Hb_000754_070 Hb_000754_070 Hb_005306_120--Hb_000754_070 Hb_000027_210 Hb_000027_210 Hb_005306_120--Hb_000027_210 Hb_005813_010 Hb_005813_010 Hb_005306_120--Hb_005813_010 Hb_001248_120 Hb_001248_120 Hb_005306_120--Hb_001248_120 Hb_000327_370 Hb_000327_370 Hb_187677_010--Hb_000327_370 Hb_161010_010 Hb_161010_010 Hb_187677_010--Hb_161010_010 Hb_012565_040 Hb_012565_040 Hb_187677_010--Hb_012565_040 Hb_002659_030 Hb_002659_030 Hb_187677_010--Hb_002659_030 Hb_003878_220 Hb_003878_220 Hb_187677_010--Hb_003878_220 Hb_000189_590 Hb_000189_590 Hb_011947_020--Hb_000189_590 Hb_030982_060 Hb_030982_060 Hb_011947_020--Hb_030982_060 Hb_000824_050 Hb_000824_050 Hb_011947_020--Hb_000824_050 Hb_023827_020 Hb_023827_020 Hb_011947_020--Hb_023827_020 Hb_032225_030 Hb_032225_030 Hb_011947_020--Hb_032225_030 Hb_004330_080 Hb_004330_080 Hb_011947_020--Hb_004330_080 Hb_018117_020 Hb_018117_020 Hb_000849_060--Hb_018117_020 Hb_000679_190 Hb_000679_190 Hb_000849_060--Hb_000679_190 Hb_000849_060--Hb_015778_030 Hb_000586_030 Hb_000586_030 Hb_000849_060--Hb_000586_030 Hb_044486_030 Hb_044486_030 Hb_000849_060--Hb_044486_030 Hb_000849_060--Hb_023827_020 Hb_015778_030--Hb_023827_020 Hb_000336_230 Hb_000336_230 Hb_015778_030--Hb_000336_230 Hb_006922_090 Hb_006922_090 Hb_015778_030--Hb_006922_090 Hb_015778_030--Hb_018117_020 Hb_000381_110 Hb_000381_110 Hb_015778_030--Hb_000381_110 Hb_000300_410 Hb_000300_410 Hb_001989_100--Hb_000300_410 Hb_012707_010 Hb_012707_010 Hb_001989_100--Hb_012707_010 Hb_000950_030 Hb_000950_030 Hb_001989_100--Hb_000950_030 Hb_020805_140 Hb_020805_140 Hb_001989_100--Hb_020805_140 Hb_000496_110 Hb_000496_110 Hb_001989_100--Hb_000496_110 Hb_005976_010 Hb_005976_010 Hb_001989_100--Hb_005976_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.18909 0 2.84648 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.252081 0.792352 0.608857 1.22308 0.666201

CAGE analysis