Hb_018117_020

Information

Type -
Description -
Location Contig18117: 35050-35650
Sequence    

Annotation

kegg
ID rcu:RCOM_1409980
description nicotinate phosphoribosyltransferase, putative
nr
ID XP_012079249.1
description PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
swissprot
ID Q8RWM2
description Nicotinate phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=NAPRT1 PE=2 SV=1
trembl
ID A0A067KI49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12411 PE=4 SV=1
Gene Ontology
ID GO:0004514
description nicotinate phosphoribosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018117_020 0.0 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
2 Hb_000849_060 0.1336801903 - - putative sodium-dependent transporter yocS [Morus notabilis]
3 Hb_000679_190 0.1944657655 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
4 Hb_000240_100 0.2127181817 - - PREDICTED: ras-related protein Rab5-like [Eucalyptus grandis]
5 Hb_015778_030 0.2149578659 - - PREDICTED: probable myosin light chain kinase DDB_G0279831 [Jatropha curcas]
6 Hb_038564_010 0.2150476643 - - PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Jatropha curcas]
7 Hb_005694_020 0.2241047221 - - PREDICTED: ORM1-like protein 2 [Gossypium raimondii]
8 Hb_000369_120 0.2246729085 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Jatropha curcas]
9 Hb_007054_010 0.2249850585 - - PREDICTED: WD repeat-containing protein 82 [Jatropha curcas]
10 Hb_000586_030 0.2305516679 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
11 Hb_027760_020 0.2324632405 - - hypothetical protein M569_04462, partial [Genlisea aurea]
12 Hb_158163_010 0.2343618611 - - protein binding protein, putative [Ricinus communis]
13 Hb_142343_010 0.2350357474 - - ATP binding protein, putative [Ricinus communis]
14 Hb_023827_020 0.2352107348 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
15 Hb_022593_010 0.2421708553 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
16 Hb_003305_020 0.2427015174 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]
17 Hb_000824_050 0.2442839921 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
18 Hb_003098_080 0.2447475743 - - -
19 Hb_135940_010 0.246126824 - - hypothetical protein JCGZ_18294 [Jatropha curcas]
20 Hb_088327_010 0.2483452714 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]

Gene co-expression network

sample Hb_018117_020 Hb_018117_020 Hb_000849_060 Hb_000849_060 Hb_018117_020--Hb_000849_060 Hb_000679_190 Hb_000679_190 Hb_018117_020--Hb_000679_190 Hb_000240_100 Hb_000240_100 Hb_018117_020--Hb_000240_100 Hb_015778_030 Hb_015778_030 Hb_018117_020--Hb_015778_030 Hb_038564_010 Hb_038564_010 Hb_018117_020--Hb_038564_010 Hb_005694_020 Hb_005694_020 Hb_018117_020--Hb_005694_020 Hb_000849_060--Hb_000679_190 Hb_000849_060--Hb_015778_030 Hb_000586_030 Hb_000586_030 Hb_000849_060--Hb_000586_030 Hb_044486_030 Hb_044486_030 Hb_000849_060--Hb_044486_030 Hb_023827_020 Hb_023827_020 Hb_000849_060--Hb_023827_020 Hb_001946_310 Hb_001946_310 Hb_000679_190--Hb_001946_310 Hb_000824_050 Hb_000824_050 Hb_000679_190--Hb_000824_050 Hb_135757_020 Hb_135757_020 Hb_000679_190--Hb_135757_020 Hb_000679_190--Hb_000586_030 Hb_001318_050 Hb_001318_050 Hb_000679_190--Hb_001318_050 Hb_003780_020 Hb_003780_020 Hb_000679_190--Hb_003780_020 Hb_011512_050 Hb_011512_050 Hb_000240_100--Hb_011512_050 Hb_000369_120 Hb_000369_120 Hb_000240_100--Hb_000369_120 Hb_001969_020 Hb_001969_020 Hb_000240_100--Hb_001969_020 Hb_027760_020 Hb_027760_020 Hb_000240_100--Hb_027760_020 Hb_000217_010 Hb_000217_010 Hb_000240_100--Hb_000217_010 Hb_000240_120 Hb_000240_120 Hb_000240_100--Hb_000240_120 Hb_015778_030--Hb_023827_020 Hb_000336_230 Hb_000336_230 Hb_015778_030--Hb_000336_230 Hb_006922_090 Hb_006922_090 Hb_015778_030--Hb_006922_090 Hb_000381_110 Hb_000381_110 Hb_015778_030--Hb_000381_110 Hb_038564_010--Hb_000586_030 Hb_142343_010 Hb_142343_010 Hb_038564_010--Hb_142343_010 Hb_088327_010 Hb_088327_010 Hb_038564_010--Hb_088327_010 Hb_003697_050 Hb_003697_050 Hb_038564_010--Hb_003697_050 Hb_000019_180 Hb_000019_180 Hb_038564_010--Hb_000019_180 Hb_138475_010 Hb_138475_010 Hb_038564_010--Hb_138475_010 Hb_002078_260 Hb_002078_260 Hb_005694_020--Hb_002078_260 Hb_007894_230 Hb_007894_230 Hb_005694_020--Hb_007894_230 Hb_082006_010 Hb_082006_010 Hb_005694_020--Hb_082006_010 Hb_041205_010 Hb_041205_010 Hb_005694_020--Hb_041205_010 Hb_132180_010 Hb_132180_010 Hb_005694_020--Hb_132180_010 Hb_029142_070 Hb_029142_070 Hb_005694_020--Hb_029142_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.317075 0.0726233 4.571 0.0867583 1.78624
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.42224 1.59593 2.54617 3.56298 1.11813

CAGE analysis