Hb_000679_190

Information

Type -
Description -
Location Contig679: 132308-134406
Sequence    

Annotation

kegg
ID pxb:103946700
description uncharacterized LOC103946700
nr
ID XP_012076567.1
description PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID F6H326
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53697: 132509-133368 , PASA_asmbl_53698: 131561-134242 , PASA_asmbl_53699: 131561-134242
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000679_190 0.0 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
2 Hb_001946_310 0.145138632 - - PREDICTED: probable ethanolamine kinase isoform X2 [Jatropha curcas]
3 Hb_000824_050 0.146131384 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
4 Hb_135757_020 0.1469490576 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
5 Hb_000586_030 0.1497980805 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
6 Hb_001318_050 0.154604398 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
7 Hb_003780_020 0.1552150883 - - PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform X2 [Glycine max]
8 Hb_004094_020 0.1627966126 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
9 Hb_007383_020 0.1650263996 - - conserved hypothetical protein [Ricinus communis]
10 Hb_038564_010 0.1681846474 - - PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Jatropha curcas]
11 Hb_000168_010 0.1711035531 - - PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Populus euphratica]
12 Hb_001104_100 0.172201931 - - RecName: Full=Enolase 2; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Allergen=Hev b 9 [Hevea brasiliensis]
13 Hb_142343_010 0.1724807156 - - ATP binding protein, putative [Ricinus communis]
14 Hb_012678_020 0.17251265 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
15 Hb_012678_010 0.1739248064 - - PREDICTED: outer envelope protein 61-like [Gossypium raimondii]
16 Hb_000221_240 0.1761033056 - - chloroplast 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Hevea brasiliensis]
17 Hb_000800_090 0.1775149697 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
18 Hb_002490_010 0.1777075804 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
19 Hb_000928_190 0.1798130241 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
20 Hb_000136_100 0.1813867832 - - PREDICTED: syntaxin-61 [Jatropha curcas]

Gene co-expression network

sample Hb_000679_190 Hb_000679_190 Hb_001946_310 Hb_001946_310 Hb_000679_190--Hb_001946_310 Hb_000824_050 Hb_000824_050 Hb_000679_190--Hb_000824_050 Hb_135757_020 Hb_135757_020 Hb_000679_190--Hb_135757_020 Hb_000586_030 Hb_000586_030 Hb_000679_190--Hb_000586_030 Hb_001318_050 Hb_001318_050 Hb_000679_190--Hb_001318_050 Hb_003780_020 Hb_003780_020 Hb_000679_190--Hb_003780_020 Hb_000800_090 Hb_000800_090 Hb_001946_310--Hb_000800_090 Hb_001799_060 Hb_001799_060 Hb_001946_310--Hb_001799_060 Hb_000402_130 Hb_000402_130 Hb_001946_310--Hb_000402_130 Hb_001946_310--Hb_001318_050 Hb_003305_020 Hb_003305_020 Hb_001946_310--Hb_003305_020 Hb_000025_190 Hb_000025_190 Hb_001946_310--Hb_000025_190 Hb_000824_050--Hb_135757_020 Hb_006922_090 Hb_006922_090 Hb_000824_050--Hb_006922_090 Hb_023827_020 Hb_023827_020 Hb_000824_050--Hb_023827_020 Hb_004094_020 Hb_004094_020 Hb_000824_050--Hb_004094_020 Hb_000824_050--Hb_001946_310 Hb_135757_020--Hb_004094_020 Hb_000221_240 Hb_000221_240 Hb_135757_020--Hb_000221_240 Hb_001021_010 Hb_001021_010 Hb_135757_020--Hb_001021_010 Hb_004330_080 Hb_004330_080 Hb_135757_020--Hb_004330_080 Hb_019280_020 Hb_019280_020 Hb_135757_020--Hb_019280_020 Hb_003606_060 Hb_003606_060 Hb_000586_030--Hb_003606_060 Hb_038564_010 Hb_038564_010 Hb_000586_030--Hb_038564_010 Hb_000168_010 Hb_000168_010 Hb_000586_030--Hb_000168_010 Hb_000586_030--Hb_003780_020 Hb_012678_010 Hb_012678_010 Hb_000586_030--Hb_012678_010 Hb_001894_070 Hb_001894_070 Hb_000586_030--Hb_001894_070 Hb_007383_020 Hb_007383_020 Hb_001318_050--Hb_007383_020 Hb_005648_010 Hb_005648_010 Hb_001318_050--Hb_005648_010 Hb_001318_050--Hb_000025_190 Hb_012678_020 Hb_012678_020 Hb_001318_050--Hb_012678_020 Hb_004880_150 Hb_004880_150 Hb_001318_050--Hb_004880_150 Hb_001318_050--Hb_000800_090 Hb_003780_020--Hb_012678_010 Hb_003780_020--Hb_012678_020 Hb_007558_100 Hb_007558_100 Hb_003780_020--Hb_007558_100 Hb_002150_040 Hb_002150_040 Hb_003780_020--Hb_002150_040 Hb_005218_020 Hb_005218_020 Hb_003780_020--Hb_005218_020 Hb_004881_030 Hb_004881_030 Hb_003780_020--Hb_004881_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.13495 0.117402 0.273874 1.66204 0.13809 0.620706
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.376291 0.338215 0.620535 1.36173 0.430931

CAGE analysis