Hb_004881_030

Information

Type -
Description -
Location Contig4881: 33497-34537
Sequence    

Annotation

kegg
ID rcu:RCOM_1194170
description hypothetical protein
nr
ID XP_012066527.1
description PREDICTED: uncharacterized protein LOC105629532 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LEY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00158 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45107: 32321-33792
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004881_030 0.0 - - PREDICTED: uncharacterized protein LOC105629532 isoform X1 [Jatropha curcas]
2 Hb_001104_130 0.0736969454 - - C-14 sterol reductase, putative [Ricinus communis]
3 Hb_000107_110 0.0760591332 - - nucleic acid binding protein, putative [Ricinus communis]
4 Hb_002603_050 0.0771166948 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1-like isoform X1 [Jatropha curcas]
5 Hb_003052_180 0.091915957 - - Diacylglycerol Cholinephosphotransferase [Ricinus communis]
6 Hb_033152_070 0.0961595127 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
7 Hb_000928_190 0.1043756503 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
8 Hb_003207_020 0.1059072687 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
9 Hb_010042_020 0.1077410176 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
10 Hb_012678_020 0.1087954715 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
11 Hb_009661_030 0.1097275766 - - PREDICTED: SPX and EXS domain-containing protein 1-like [Jatropha curcas]
12 Hb_002902_130 0.1110134671 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
13 Hb_005218_020 0.1133829237 - - Uncharacterized protein isoform 3 [Theobroma cacao]
14 Hb_002481_060 0.1135953992 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
15 Hb_000136_100 0.1146565023 - - PREDICTED: syntaxin-61 [Jatropha curcas]
16 Hb_000014_040 0.1153290793 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000258_240 0.1154154775 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
18 Hb_000004_020 0.1156630804 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004046_030 0.1156904044 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
20 Hb_003529_030 0.1160467663 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_004881_030 Hb_004881_030 Hb_001104_130 Hb_001104_130 Hb_004881_030--Hb_001104_130 Hb_000107_110 Hb_000107_110 Hb_004881_030--Hb_000107_110 Hb_002603_050 Hb_002603_050 Hb_004881_030--Hb_002603_050 Hb_003052_180 Hb_003052_180 Hb_004881_030--Hb_003052_180 Hb_033152_070 Hb_033152_070 Hb_004881_030--Hb_033152_070 Hb_000928_190 Hb_000928_190 Hb_004881_030--Hb_000928_190 Hb_001104_130--Hb_000107_110 Hb_002226_080 Hb_002226_080 Hb_001104_130--Hb_002226_080 Hb_009661_030 Hb_009661_030 Hb_001104_130--Hb_009661_030 Hb_000014_040 Hb_000014_040 Hb_001104_130--Hb_000014_040 Hb_000004_020 Hb_000004_020 Hb_001104_130--Hb_000004_020 Hb_001894_070 Hb_001894_070 Hb_000107_110--Hb_001894_070 Hb_010042_020 Hb_010042_020 Hb_000107_110--Hb_010042_020 Hb_000107_110--Hb_033152_070 Hb_000107_110--Hb_003052_180 Hb_002603_050--Hb_003052_180 Hb_002603_050--Hb_001104_130 Hb_002603_050--Hb_009661_030 Hb_002603_050--Hb_000004_020 Hb_000032_070 Hb_000032_070 Hb_002603_050--Hb_000032_070 Hb_001842_010 Hb_001842_010 Hb_003052_180--Hb_001842_010 Hb_003052_180--Hb_033152_070 Hb_003071_070 Hb_003071_070 Hb_003052_180--Hb_003071_070 Hb_001946_180 Hb_001946_180 Hb_003052_180--Hb_001946_180 Hb_005218_020 Hb_005218_020 Hb_003052_180--Hb_005218_020 Hb_033152_070--Hb_010042_020 Hb_003207_020 Hb_003207_020 Hb_033152_070--Hb_003207_020 Hb_033152_070--Hb_000928_190 Hb_004525_040 Hb_004525_040 Hb_033152_070--Hb_004525_040 Hb_000402_130 Hb_000402_130 Hb_033152_070--Hb_000402_130 Hb_000258_240 Hb_000258_240 Hb_000928_190--Hb_000258_240 Hb_002781_030 Hb_002781_030 Hb_000928_190--Hb_002781_030 Hb_000928_190--Hb_010042_020 Hb_001481_150 Hb_001481_150 Hb_000928_190--Hb_001481_150 Hb_003988_050 Hb_003988_050 Hb_000928_190--Hb_003988_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.16885 0.878312 1.56014 8.04976 1.53895 2.52149
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.16964 2.42699 1.81948 3.36707 4.51219

CAGE analysis