Hb_004094_020

Information

Type -
Description -
Location Contig4094: 26740-33111
Sequence    

Annotation

kegg
ID tcc:TCM_043508
description Pyruvate kinase family protein isoform 1
nr
ID XP_007010157.1
description Pyruvate kinase family protein isoform 1 [Theobroma cacao]
swissprot
ID Q42954
description Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A061FQL5
description Pyruvate kinase OS=Theobroma cacao GN=TCM_043508 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate cytosolic isozyme-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004094_020 0.0 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
2 Hb_183867_010 0.0823959876 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Populus euphratica]
3 Hb_135757_020 0.090775 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
4 Hb_005914_140 0.1033485143 - - PREDICTED: uncharacterized protein LOC105632183 [Jatropha curcas]
5 Hb_000494_030 0.1039611531 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
6 Hb_001006_270 0.1071573233 - - peptide transporter, putative [Ricinus communis]
7 Hb_003994_220 0.1075585954 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
8 Hb_069619_010 0.1085015257 - - Aspartic proteinase precursor, putative [Ricinus communis]
9 Hb_031527_080 0.1168027053 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
10 Hb_000649_060 0.1174863444 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
11 Hb_000701_030 0.1176657179 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
12 Hb_012678_020 0.1179100823 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
13 Hb_001900_100 0.1181557355 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]
14 Hb_001021_010 0.1194730097 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
15 Hb_000928_190 0.1209738084 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
16 Hb_002631_130 0.1211257229 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
17 Hb_029510_100 0.1214841766 - - scab resistance family protein [Populus trichocarpa]
18 Hb_000800_090 0.1215427348 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
19 Hb_004450_070 0.1228094651 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
20 Hb_000152_700 0.1230500241 - - PREDICTED: E3 ubiquitin protein ligase RIN2 [Jatropha curcas]

Gene co-expression network

sample Hb_004094_020 Hb_004094_020 Hb_183867_010 Hb_183867_010 Hb_004094_020--Hb_183867_010 Hb_135757_020 Hb_135757_020 Hb_004094_020--Hb_135757_020 Hb_005914_140 Hb_005914_140 Hb_004094_020--Hb_005914_140 Hb_000494_030 Hb_000494_030 Hb_004094_020--Hb_000494_030 Hb_001006_270 Hb_001006_270 Hb_004094_020--Hb_001006_270 Hb_003994_220 Hb_003994_220 Hb_004094_020--Hb_003994_220 Hb_013358_050 Hb_013358_050 Hb_183867_010--Hb_013358_050 Hb_132101_010 Hb_132101_010 Hb_183867_010--Hb_132101_010 Hb_183867_010--Hb_003994_220 Hb_031527_080 Hb_031527_080 Hb_183867_010--Hb_031527_080 Hb_022092_010 Hb_022092_010 Hb_183867_010--Hb_022092_010 Hb_000221_240 Hb_000221_240 Hb_135757_020--Hb_000221_240 Hb_001021_010 Hb_001021_010 Hb_135757_020--Hb_001021_010 Hb_004330_080 Hb_004330_080 Hb_135757_020--Hb_004330_080 Hb_000824_050 Hb_000824_050 Hb_135757_020--Hb_000824_050 Hb_019280_020 Hb_019280_020 Hb_135757_020--Hb_019280_020 Hb_000928_190 Hb_000928_190 Hb_005914_140--Hb_000928_190 Hb_006683_020 Hb_006683_020 Hb_005914_140--Hb_006683_020 Hb_001318_050 Hb_001318_050 Hb_005914_140--Hb_001318_050 Hb_132880_040 Hb_132880_040 Hb_005914_140--Hb_132880_040 Hb_019280_010 Hb_019280_010 Hb_005914_140--Hb_019280_010 Hb_000701_030 Hb_000701_030 Hb_000494_030--Hb_000701_030 Hb_000683_050 Hb_000683_050 Hb_000494_030--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_000494_030--Hb_004030_060 Hb_010390_010 Hb_010390_010 Hb_000494_030--Hb_010390_010 Hb_021576_070 Hb_021576_070 Hb_000494_030--Hb_021576_070 Hb_007416_070 Hb_007416_070 Hb_000494_030--Hb_007416_070 Hb_001006_270--Hb_000928_190 Hb_001481_150 Hb_001481_150 Hb_001006_270--Hb_001481_150 Hb_000035_330 Hb_000035_330 Hb_001006_270--Hb_000035_330 Hb_000237_050 Hb_000237_050 Hb_001006_270--Hb_000237_050 Hb_001006_270--Hb_000701_030 Hb_003038_040 Hb_003038_040 Hb_003994_220--Hb_003038_040 Hb_001703_050 Hb_001703_050 Hb_003994_220--Hb_001703_050 Hb_003994_220--Hb_031527_080 Hb_003097_140 Hb_003097_140 Hb_003994_220--Hb_003097_140 Hb_007416_210 Hb_007416_210 Hb_003994_220--Hb_007416_210 Hb_003994_220--Hb_001021_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.80653 8.81534 7.10052 28.1186 4.45606 8.32436
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.8482 3.88713 9.63771 25.7854 13.4405

CAGE analysis