Hb_000754_070

Information

Type -
Description -
Location Contig754: 40928-43555
Sequence    

Annotation

kegg
ID rcu:RCOM_1523320
description hypothetical protein
nr
ID XP_002513164.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RHE5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1523320 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000754_070 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_005332_040 0.1623431662 - - hypothetical protein RCOM_0530890 [Ricinus communis]
3 Hb_002686_260 0.2032040353 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
4 Hb_001148_100 0.2074842949 - - -
5 Hb_000086_290 0.2130237359 - - PREDICTED: TBC1 domain family member 15-like [Jatropha curcas]
6 Hb_000027_210 0.2142026781 - - Os01g0689300, partial [Oryza sativa Japonica Group]
7 Hb_032972_010 0.2149449458 - - Glycolipid transfer protein, putative [Ricinus communis]
8 Hb_002835_340 0.2162240714 - - PREDICTED: peroxisomal primary amine oxidase [Jatropha curcas]
9 Hb_000317_420 0.2202200548 - - PREDICTED: extradiol ring-cleavage dioxygenase [Jatropha curcas]
10 Hb_000260_280 0.2228849398 - - auxin:hydrogen symporter, putative [Ricinus communis]
11 Hb_002498_270 0.2238811091 - - prephenate dehydratase, putative [Ricinus communis]
12 Hb_005408_070 0.2258543681 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP4 [Jatropha curcas]
13 Hb_000175_470 0.231709837 - - lactoylglutathione lyase, putative [Ricinus communis]
14 Hb_048384_010 0.233080595 - - PREDICTED: probable receptor-like protein kinase At2g42960 [Cucumis sativus]
15 Hb_000011_310 0.2331918468 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
16 Hb_012753_030 0.2341536962 - - PREDICTED: probable transcriptional regulator SLK3 [Jatropha curcas]
17 Hb_000567_180 0.234240164 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.5 [Jatropha curcas]
18 Hb_005306_120 0.2357505569 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002781_050 0.2390958369 - - cytochrome B5 isoform 1, putative [Ricinus communis]
20 Hb_002539_040 0.2420820648 - - SPFH domain-containing protein 2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000754_070 Hb_000754_070 Hb_005332_040 Hb_005332_040 Hb_000754_070--Hb_005332_040 Hb_002686_260 Hb_002686_260 Hb_000754_070--Hb_002686_260 Hb_001148_100 Hb_001148_100 Hb_000754_070--Hb_001148_100 Hb_000086_290 Hb_000086_290 Hb_000754_070--Hb_000086_290 Hb_000027_210 Hb_000027_210 Hb_000754_070--Hb_000027_210 Hb_032972_010 Hb_032972_010 Hb_000754_070--Hb_032972_010 Hb_029977_020 Hb_029977_020 Hb_005332_040--Hb_029977_020 Hb_005332_040--Hb_002686_260 Hb_005332_040--Hb_001148_100 Hb_002200_070 Hb_002200_070 Hb_005332_040--Hb_002200_070 Hb_005408_070 Hb_005408_070 Hb_005332_040--Hb_005408_070 Hb_001922_030 Hb_001922_030 Hb_002686_260--Hb_001922_030 Hb_002097_140 Hb_002097_140 Hb_002686_260--Hb_002097_140 Hb_014720_100 Hb_014720_100 Hb_002686_260--Hb_014720_100 Hb_002686_260--Hb_005408_070 Hb_123301_010 Hb_123301_010 Hb_002686_260--Hb_123301_010 Hb_002781_050 Hb_002781_050 Hb_001148_100--Hb_002781_050 Hb_000696_070 Hb_000696_070 Hb_001148_100--Hb_000696_070 Hb_000175_470 Hb_000175_470 Hb_001148_100--Hb_000175_470 Hb_002151_060 Hb_002151_060 Hb_001148_100--Hb_002151_060 Hb_158092_040 Hb_158092_040 Hb_001148_100--Hb_158092_040 Hb_001148_090 Hb_001148_090 Hb_001148_100--Hb_001148_090 Hb_001902_200 Hb_001902_200 Hb_000086_290--Hb_001902_200 Hb_003878_050 Hb_003878_050 Hb_000086_290--Hb_003878_050 Hb_000011_310 Hb_000011_310 Hb_000086_290--Hb_000011_310 Hb_048384_010 Hb_048384_010 Hb_000086_290--Hb_048384_010 Hb_000260_280 Hb_000260_280 Hb_000086_290--Hb_000260_280 Hb_000086_290--Hb_032972_010 Hb_000027_210--Hb_002781_050 Hb_000027_210--Hb_001148_090 Hb_000027_210--Hb_001148_100 Hb_002539_040 Hb_002539_040 Hb_000027_210--Hb_002539_040 Hb_000027_210--Hb_002151_060 Hb_001486_350 Hb_001486_350 Hb_000027_210--Hb_001486_350 Hb_032972_010--Hb_000260_280 Hb_175933_010 Hb_175933_010 Hb_032972_010--Hb_175933_010 Hb_000683_100 Hb_000683_100 Hb_032972_010--Hb_000683_100 Hb_032972_010--Hb_000027_210 Hb_001208_030 Hb_001208_030 Hb_032972_010--Hb_001208_030 Hb_001208_040 Hb_001208_040 Hb_032972_010--Hb_001208_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.381191 2.70225 8.79959 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.45888 3.44129 1.02904 3.41803 1.12305

CAGE analysis