Hb_171693_010

Information

Type -
Description -
Location Contig171693: 13-660
Sequence    

Annotation

kegg
ID csv:101208822
description uncharacterized LOC101208822
nr
ID KDP24664.1
description hypothetical protein JCGZ_26531 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYR1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26531 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_171693_010 0.0 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
2 Hb_002076_030 0.2285330829 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
3 Hb_186312_010 0.2682164494 - - PREDICTED: O-acyltransferase WSD1-like [Populus euphratica]
4 Hb_005474_050 0.280108498 - - putative leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
5 Hb_002498_150 0.2832998666 - - conserved hypothetical protein [Ricinus communis]
6 Hb_056506_010 0.2867017492 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
7 Hb_001770_010 0.291985154 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
8 Hb_007137_020 0.2940025383 - - multicopper oxidase, putative [Ricinus communis]
9 Hb_022793_010 0.2965648079 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
10 Hb_095449_010 0.2971590027 - - PREDICTED: low-temperature-induced 65 kDa protein-like [Jatropha curcas]
11 Hb_001008_020 0.2976740284 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_009898_060 0.2995478212 - - hypothetical protein POPTR_0007s09865g [Populus trichocarpa]
13 Hb_004767_060 0.3059995978 - - PREDICTED: uncharacterized protein LOC105761928 [Gossypium raimondii]
14 Hb_000084_170 0.3214601471 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000044_050 0.3222184821 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
16 Hb_000392_510 0.3225742017 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Jatropha curcas]
17 Hb_000286_180 0.322639567 - - PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
18 Hb_003649_030 0.3241710867 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
19 Hb_007425_020 0.324213151 transcription factor TF Family: ERF PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Jatropha curcas]
20 Hb_005048_080 0.3243734964 - - PREDICTED: PAP-specific phosphatase HAL2-like [Jatropha curcas]

Gene co-expression network

sample Hb_171693_010 Hb_171693_010 Hb_002076_030 Hb_002076_030 Hb_171693_010--Hb_002076_030 Hb_186312_010 Hb_186312_010 Hb_171693_010--Hb_186312_010 Hb_005474_050 Hb_005474_050 Hb_171693_010--Hb_005474_050 Hb_002498_150 Hb_002498_150 Hb_171693_010--Hb_002498_150 Hb_056506_010 Hb_056506_010 Hb_171693_010--Hb_056506_010 Hb_001770_010 Hb_001770_010 Hb_171693_010--Hb_001770_010 Hb_171900_030 Hb_171900_030 Hb_002076_030--Hb_171900_030 Hb_001771_060 Hb_001771_060 Hb_002076_030--Hb_001771_060 Hb_004108_120 Hb_004108_120 Hb_002076_030--Hb_004108_120 Hb_002076_030--Hb_186312_010 Hb_002999_140 Hb_002999_140 Hb_002076_030--Hb_002999_140 Hb_002006_120 Hb_002006_120 Hb_002076_030--Hb_002006_120 Hb_003090_170 Hb_003090_170 Hb_186312_010--Hb_003090_170 Hb_000369_040 Hb_000369_040 Hb_186312_010--Hb_000369_040 Hb_002631_110 Hb_002631_110 Hb_186312_010--Hb_002631_110 Hb_032202_010 Hb_032202_010 Hb_186312_010--Hb_032202_010 Hb_000068_040 Hb_000068_040 Hb_186312_010--Hb_000068_040 Hb_183193_010 Hb_183193_010 Hb_005474_050--Hb_183193_010 Hb_006717_020 Hb_006717_020 Hb_005474_050--Hb_006717_020 Hb_095449_010 Hb_095449_010 Hb_005474_050--Hb_095449_010 Hb_008078_020 Hb_008078_020 Hb_005474_050--Hb_008078_020 Hb_003867_030 Hb_003867_030 Hb_005474_050--Hb_003867_030 Hb_002218_060 Hb_002218_060 Hb_005474_050--Hb_002218_060 Hb_027337_050 Hb_027337_050 Hb_002498_150--Hb_027337_050 Hb_130579_050 Hb_130579_050 Hb_002498_150--Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_002498_150--Hb_002025_240 Hb_004191_030 Hb_004191_030 Hb_002498_150--Hb_004191_030 Hb_001899_040 Hb_001899_040 Hb_002498_150--Hb_001899_040 Hb_002571_050 Hb_002571_050 Hb_002498_150--Hb_002571_050 Hb_001008_020 Hb_001008_020 Hb_056506_010--Hb_001008_020 Hb_007137_020 Hb_007137_020 Hb_056506_010--Hb_007137_020 Hb_009898_060 Hb_009898_060 Hb_056506_010--Hb_009898_060 Hb_003649_030 Hb_003649_030 Hb_056506_010--Hb_003649_030 Hb_000061_110 Hb_000061_110 Hb_056506_010--Hb_000061_110 Hb_000044_050 Hb_000044_050 Hb_056506_010--Hb_000044_050 Hb_023344_020 Hb_023344_020 Hb_001770_010--Hb_023344_020 Hb_000930_020 Hb_000930_020 Hb_001770_010--Hb_000930_020 Hb_001770_010--Hb_003090_170 Hb_001770_010--Hb_186312_010 Hb_000805_220 Hb_000805_220 Hb_001770_010--Hb_000805_220 Hb_002060_070 Hb_002060_070 Hb_001770_010--Hb_002060_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.221571 0 0.0496466 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0817881 0 0.0335824 0.157758

CAGE analysis