Hb_003649_030

Information

Type -
Description -
Location Contig3649: 28356-33274
Sequence    

Annotation

kegg
ID pop:POPTR_0223s00200g
description hypothetical protein
nr
ID XP_012081232.1
description PREDICTED: receptor-like protein kinase [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067K1U5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16973 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003649_030 0.0 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
2 Hb_000061_110 0.0563701642 - - -
3 Hb_056506_010 0.128040324 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
4 Hb_000866_390 0.1348040179 - - PREDICTED: O-glucosyltransferase rumi homolog [Jatropha curcas]
5 Hb_009898_060 0.1420764048 - - hypothetical protein POPTR_0007s09865g [Populus trichocarpa]
6 Hb_001008_020 0.1493710696 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_001411_100 0.1507593397 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
8 Hb_000417_150 0.1528965703 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
9 Hb_004713_050 0.1662351031 - - RecName: Full=Beta-amyrin synthase [Betula platyphylla]
10 Hb_002815_040 0.1713047917 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
11 Hb_000600_080 0.171522009 - - -
12 Hb_000685_140 0.1735684796 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
13 Hb_001355_060 0.1755813675 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
14 Hb_026053_030 0.1800070469 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
15 Hb_000975_260 0.18179299 - - conserved hypothetical protein [Ricinus communis]
16 Hb_028872_100 0.1861495202 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
17 Hb_008195_020 0.189289419 - - Vacuolar-processing enzyme precursor [Ricinus communis]
18 Hb_003938_100 0.1911225329 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000243_050 0.1916448169 - - ADP-ribosylation factor, putative [Ricinus communis]
20 Hb_138667_010 0.1930435249 - - hypothetical protein JCGZ_04974 [Jatropha curcas]

Gene co-expression network

sample Hb_003649_030 Hb_003649_030 Hb_000061_110 Hb_000061_110 Hb_003649_030--Hb_000061_110 Hb_056506_010 Hb_056506_010 Hb_003649_030--Hb_056506_010 Hb_000866_390 Hb_000866_390 Hb_003649_030--Hb_000866_390 Hb_009898_060 Hb_009898_060 Hb_003649_030--Hb_009898_060 Hb_001008_020 Hb_001008_020 Hb_003649_030--Hb_001008_020 Hb_001411_100 Hb_001411_100 Hb_003649_030--Hb_001411_100 Hb_000061_110--Hb_009898_060 Hb_002815_040 Hb_002815_040 Hb_000061_110--Hb_002815_040 Hb_000061_110--Hb_001411_100 Hb_001355_060 Hb_001355_060 Hb_000061_110--Hb_001355_060 Hb_000061_110--Hb_056506_010 Hb_056506_010--Hb_001008_020 Hb_007137_020 Hb_007137_020 Hb_056506_010--Hb_007137_020 Hb_056506_010--Hb_009898_060 Hb_000044_050 Hb_000044_050 Hb_056506_010--Hb_000044_050 Hb_004713_050 Hb_004713_050 Hb_000866_390--Hb_004713_050 Hb_085010_010 Hb_085010_010 Hb_000866_390--Hb_085010_010 Hb_000059_080 Hb_000059_080 Hb_000866_390--Hb_000059_080 Hb_001971_020 Hb_001971_020 Hb_000866_390--Hb_001971_020 Hb_000866_390--Hb_001411_100 Hb_001899_040 Hb_001899_040 Hb_009898_060--Hb_001899_040 Hb_002056_140 Hb_002056_140 Hb_009898_060--Hb_002056_140 Hb_000269_040 Hb_000269_040 Hb_009898_060--Hb_000269_040 Hb_001008_020--Hb_007137_020 Hb_001008_020--Hb_085010_010 Hb_001008_020--Hb_000866_390 Hb_001008_020--Hb_000044_050 Hb_000685_140 Hb_000685_140 Hb_001411_100--Hb_000685_140 Hb_000600_080 Hb_000600_080 Hb_001411_100--Hb_000600_080 Hb_000101_320 Hb_000101_320 Hb_001411_100--Hb_000101_320 Hb_028872_100 Hb_028872_100 Hb_001411_100--Hb_028872_100 Hb_001452_090 Hb_001452_090 Hb_001411_100--Hb_001452_090 Hb_000417_150 Hb_000417_150 Hb_001411_100--Hb_000417_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.355657 0 0.0690671 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.18045 0.389948

CAGE analysis