Hb_023344_020

Information

Type -
Description -
Location Contig23344: 57404-57872
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023344_020 0.0 - - -
2 Hb_001770_010 0.1752151138 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
3 Hb_010457_040 0.2345734978 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
4 Hb_080192_010 0.2492452591 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_003589_100 0.2557736415 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
6 Hb_009492_020 0.2610930098 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
7 Hb_000271_080 0.2686817842 - - hypothetical protein POPTR_0006s08460g [Populus trichocarpa]
8 Hb_000780_180 0.270196748 - - PREDICTED: uncharacterized protein LOC105641547 [Jatropha curcas]
9 Hb_002837_080 0.2743547396 - - acyltransferase, putative [Ricinus communis]
10 Hb_005914_120 0.2793164422 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
11 Hb_156850_050 0.2796633215 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
12 Hb_004529_010 0.2808511673 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
13 Hb_003125_110 0.2864400052 - - PREDICTED: protein indeterminate-domain 16 [Jatropha curcas]
14 Hb_000930_020 0.2907347832 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
15 Hb_000953_110 0.2908660798 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
16 Hb_061783_010 0.2925234483 - - PREDICTED: uncharacterized protein LOC105124983 isoform X4 [Populus euphratica]
17 Hb_000853_140 0.2946057084 - - hypothetical protein POPTR_0014s12080g [Populus trichocarpa]
18 Hb_029238_040 0.29964449 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
19 Hb_000152_520 0.3002726328 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
20 Hb_001709_080 0.3003837019 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_023344_020 Hb_023344_020 Hb_001770_010 Hb_001770_010 Hb_023344_020--Hb_001770_010 Hb_010457_040 Hb_010457_040 Hb_023344_020--Hb_010457_040 Hb_080192_010 Hb_080192_010 Hb_023344_020--Hb_080192_010 Hb_003589_100 Hb_003589_100 Hb_023344_020--Hb_003589_100 Hb_009492_020 Hb_009492_020 Hb_023344_020--Hb_009492_020 Hb_000271_080 Hb_000271_080 Hb_023344_020--Hb_000271_080 Hb_000930_020 Hb_000930_020 Hb_001770_010--Hb_000930_020 Hb_003090_170 Hb_003090_170 Hb_001770_010--Hb_003090_170 Hb_186312_010 Hb_186312_010 Hb_001770_010--Hb_186312_010 Hb_000805_220 Hb_000805_220 Hb_001770_010--Hb_000805_220 Hb_002060_070 Hb_002060_070 Hb_001770_010--Hb_002060_070 Hb_005914_130 Hb_005914_130 Hb_010457_040--Hb_005914_130 Hb_001758_090 Hb_001758_090 Hb_010457_040--Hb_001758_090 Hb_002150_100 Hb_002150_100 Hb_010457_040--Hb_002150_100 Hb_025161_060 Hb_025161_060 Hb_010457_040--Hb_025161_060 Hb_025557_080 Hb_025557_080 Hb_010457_040--Hb_025557_080 Hb_000046_390 Hb_000046_390 Hb_010457_040--Hb_000046_390 Hb_003125_110 Hb_003125_110 Hb_080192_010--Hb_003125_110 Hb_005784_050 Hb_005784_050 Hb_080192_010--Hb_005784_050 Hb_005914_120 Hb_005914_120 Hb_080192_010--Hb_005914_120 Hb_000161_140 Hb_000161_140 Hb_080192_010--Hb_000161_140 Hb_005542_070 Hb_005542_070 Hb_080192_010--Hb_005542_070 Hb_000963_210 Hb_000963_210 Hb_080192_010--Hb_000963_210 Hb_003589_100--Hb_009492_020 Hb_156850_050 Hb_156850_050 Hb_003589_100--Hb_156850_050 Hb_002837_080 Hb_002837_080 Hb_003589_100--Hb_002837_080 Hb_003589_100--Hb_000805_220 Hb_061783_010 Hb_061783_010 Hb_003589_100--Hb_061783_010 Hb_000953_110 Hb_000953_110 Hb_003589_100--Hb_000953_110 Hb_009492_020--Hb_000805_220 Hb_009492_020--Hb_002837_080 Hb_009492_020--Hb_002060_070 Hb_009492_020--Hb_156850_050 Hb_009492_020--Hb_000930_020 Hb_003911_030 Hb_003911_030 Hb_000271_080--Hb_003911_030 Hb_004648_110 Hb_004648_110 Hb_000271_080--Hb_004648_110 Hb_000271_080--Hb_001770_010 Hb_000318_080 Hb_000318_080 Hb_000271_080--Hb_000318_080 Hb_092706_010 Hb_092706_010 Hb_000271_080--Hb_092706_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.212764 0 0.632446 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.150729 0 0 0.266668

CAGE analysis