Hb_010457_040

Information

Type -
Description -
Location Contig10457: 50603-57597
Sequence    

Annotation

kegg
ID cam:101491058
description uncharacterized LOC101491058
nr
ID XP_012572411.1
description PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SMM3
description Kinase, putative OS=Ricinus communis GN=RCOM_0231810 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010457_040 0.0 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
2 Hb_005914_130 0.1649739824 - - -
3 Hb_001758_090 0.1825094579 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
4 Hb_002150_100 0.1957784845 - - PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Jatropha curcas]
5 Hb_025161_060 0.2075335895 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
6 Hb_025557_080 0.2138939338 transcription factor TF Family: zf-HD -
7 Hb_000046_390 0.2147466395 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
8 Hb_025557_070 0.2180452622 transcription factor TF Family: zf-HD hypothetical protein JCGZ_11626 [Jatropha curcas]
9 Hb_004449_100 0.2218057433 - - -
10 Hb_000291_240 0.2261792463 - - hypothetical protein POPTR_0005s16430g [Populus trichocarpa]
11 Hb_003411_120 0.2264029228 - - hypothetical protein POPTR_0010s13670g [Populus trichocarpa]
12 Hb_000638_230 0.2280419488 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
13 Hb_188281_020 0.2287092125 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
14 Hb_001454_350 0.2323661146 - - PREDICTED: uncharacterized protein LOC105643449 [Jatropha curcas]
15 Hb_004586_410 0.2340524022 - - ring finger protein, putative [Ricinus communis]
16 Hb_155215_030 0.2343443027 - - Cucumisin precursor, putative [Ricinus communis]
17 Hb_023344_020 0.2345734978 - - -
18 Hb_000188_040 0.2355638205 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
19 Hb_000477_020 0.2379682284 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
20 Hb_145975_010 0.239070592 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_010457_040 Hb_010457_040 Hb_005914_130 Hb_005914_130 Hb_010457_040--Hb_005914_130 Hb_001758_090 Hb_001758_090 Hb_010457_040--Hb_001758_090 Hb_002150_100 Hb_002150_100 Hb_010457_040--Hb_002150_100 Hb_025161_060 Hb_025161_060 Hb_010457_040--Hb_025161_060 Hb_025557_080 Hb_025557_080 Hb_010457_040--Hb_025557_080 Hb_000046_390 Hb_000046_390 Hb_010457_040--Hb_000046_390 Hb_003411_120 Hb_003411_120 Hb_005914_130--Hb_003411_120 Hb_000482_080 Hb_000482_080 Hb_005914_130--Hb_000482_080 Hb_005914_130--Hb_001758_090 Hb_000291_240 Hb_000291_240 Hb_005914_130--Hb_000291_240 Hb_007311_050 Hb_007311_050 Hb_005914_130--Hb_007311_050 Hb_004657_070 Hb_004657_070 Hb_001758_090--Hb_004657_070 Hb_000617_300 Hb_000617_300 Hb_001758_090--Hb_000617_300 Hb_000428_040 Hb_000428_040 Hb_001758_090--Hb_000428_040 Hb_003055_100 Hb_003055_100 Hb_001758_090--Hb_003055_100 Hb_007574_040 Hb_007574_040 Hb_001758_090--Hb_007574_040 Hb_000622_190 Hb_000622_190 Hb_001758_090--Hb_000622_190 Hb_002150_100--Hb_003411_120 Hb_002119_140 Hb_002119_140 Hb_002150_100--Hb_002119_140 Hb_001097_080 Hb_001097_080 Hb_002150_100--Hb_001097_080 Hb_002150_100--Hb_005914_130 Hb_002150_100--Hb_001758_090 Hb_025161_060--Hb_025557_080 Hb_025557_070 Hb_025557_070 Hb_025161_060--Hb_025557_070 Hb_025161_060--Hb_000046_390 Hb_000638_230 Hb_000638_230 Hb_025161_060--Hb_000638_230 Hb_025161_060--Hb_000291_240 Hb_002808_010 Hb_002808_010 Hb_025161_060--Hb_002808_010 Hb_025557_080--Hb_025557_070 Hb_025557_080--Hb_000291_240 Hb_000188_040 Hb_000188_040 Hb_025557_080--Hb_000188_040 Hb_188281_020 Hb_188281_020 Hb_025557_080--Hb_188281_020 Hb_002031_020 Hb_002031_020 Hb_025557_080--Hb_002031_020 Hb_000046_390--Hb_000638_230 Hb_001454_350 Hb_001454_350 Hb_000046_390--Hb_001454_350 Hb_000046_390--Hb_025557_070 Hb_000046_390--Hb_025557_080 Hb_001019_030 Hb_001019_030 Hb_000046_390--Hb_001019_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0129793 0 0.172176 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0187642 0 0.00743509 0.0401586

CAGE analysis