Hb_007574_040

Information

Type -
Description -
Location Contig7574: 32581-33120
Sequence    

Annotation

kegg
ID rcu:RCOM_0797370
description hypothetical protein
nr
ID XP_012077282.1
description PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KP79
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07666 PE=4 SV=1
Gene Ontology
ID GO:0005886
description basic fibroblast growth factor receptor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007574_040 0.0 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
2 Hb_000297_140 0.1247214273 - - hypothetical protein RCOM_0293450 [Ricinus communis]
3 Hb_008695_220 0.1363339255 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
4 Hb_000054_010 0.1428871306 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
5 Hb_000622_120 0.1432750249 - - hypothetical protein [Hevea brasiliensis]
6 Hb_002759_030 0.1506559116 - - PREDICTED: serine/threonine-protein kinase PBS1 [Jatropha curcas]
7 Hb_000622_190 0.1550767458 - - PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
8 Hb_000030_130 0.1614113731 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
9 Hb_000115_200 0.16307856 - - PREDICTED: endonuclease 2 [Jatropha curcas]
10 Hb_000820_110 0.1631736037 - - UDP-XYL synthase 6 isoform 1 [Theobroma cacao]
11 Hb_000246_130 0.1653660037 - - tubulin alpha chain, putative [Ricinus communis]
12 Hb_003055_100 0.1670025783 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
13 Hb_030565_100 0.1689340075 - - serine hydroxymethyltransferase, putative [Ricinus communis]
14 Hb_017002_010 0.1706737629 - - PREDICTED: expansin-A15-like [Jatropha curcas]
15 Hb_001758_090 0.1715737745 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
16 Hb_019516_060 0.1726117962 - - PREDICTED: uncharacterized protein LOC105634259 [Jatropha curcas]
17 Hb_010883_180 0.1748888557 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
18 Hb_102772_010 0.1759603631 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000959_320 0.1801382864 - - PREDICTED: uncharacterized protein LOC105778325 [Gossypium raimondii]
20 Hb_000103_070 0.1802910737 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]

Gene co-expression network

sample Hb_007574_040 Hb_007574_040 Hb_000297_140 Hb_000297_140 Hb_007574_040--Hb_000297_140 Hb_008695_220 Hb_008695_220 Hb_007574_040--Hb_008695_220 Hb_000054_010 Hb_000054_010 Hb_007574_040--Hb_000054_010 Hb_000622_120 Hb_000622_120 Hb_007574_040--Hb_000622_120 Hb_002759_030 Hb_002759_030 Hb_007574_040--Hb_002759_030 Hb_000622_190 Hb_000622_190 Hb_007574_040--Hb_000622_190 Hb_000820_110 Hb_000820_110 Hb_000297_140--Hb_000820_110 Hb_006002_050 Hb_006002_050 Hb_000297_140--Hb_006002_050 Hb_030565_100 Hb_030565_100 Hb_000297_140--Hb_030565_100 Hb_000997_080 Hb_000997_080 Hb_000297_140--Hb_000997_080 Hb_000011_280 Hb_000011_280 Hb_000297_140--Hb_000011_280 Hb_000950_030 Hb_000950_030 Hb_008695_220--Hb_000950_030 Hb_017002_010 Hb_017002_010 Hb_008695_220--Hb_017002_010 Hb_000246_130 Hb_000246_130 Hb_008695_220--Hb_000246_130 Hb_000455_070 Hb_000455_070 Hb_008695_220--Hb_000455_070 Hb_014720_100 Hb_014720_100 Hb_008695_220--Hb_014720_100 Hb_000054_010--Hb_030565_100 Hb_010883_180 Hb_010883_180 Hb_000054_010--Hb_010883_180 Hb_001186_110 Hb_001186_110 Hb_000054_010--Hb_001186_110 Hb_007311_050 Hb_007311_050 Hb_000054_010--Hb_007311_050 Hb_174541_030 Hb_174541_030 Hb_000054_010--Hb_174541_030 Hb_000622_230 Hb_000622_230 Hb_000622_120--Hb_000622_230 Hb_102772_010 Hb_102772_010 Hb_000622_120--Hb_102772_010 Hb_000622_120--Hb_000622_190 Hb_000115_200 Hb_000115_200 Hb_000622_120--Hb_000115_200 Hb_177208_010 Hb_177208_010 Hb_000622_120--Hb_177208_010 Hb_005305_040 Hb_005305_040 Hb_002759_030--Hb_005305_040 Hb_001195_710 Hb_001195_710 Hb_002759_030--Hb_001195_710 Hb_014361_010 Hb_014361_010 Hb_002759_030--Hb_014361_010 Hb_000457_120 Hb_000457_120 Hb_002759_030--Hb_000457_120 Hb_000928_200 Hb_000928_200 Hb_002759_030--Hb_000928_200 Hb_001001_070 Hb_001001_070 Hb_002759_030--Hb_001001_070 Hb_000622_190--Hb_102772_010 Hb_000608_090 Hb_000608_090 Hb_000622_190--Hb_000608_090 Hb_000622_190--Hb_007311_050 Hb_004586_440 Hb_004586_440 Hb_000622_190--Hb_004586_440 Hb_000362_030 Hb_000362_030 Hb_000622_190--Hb_000362_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.52188 4.48601 23.4374 156.39 0.338077 2.15196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.86309 12.7681 2.08303 7.12117 52.9347

CAGE analysis