Hb_007311_050

Information

Type -
Description -
Location Contig7311: 58453-58932
Sequence    

Annotation

kegg
ID rcu:RCOM_0267730
description hypothetical protein
nr
ID XP_002530619.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SXA0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0267730 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007311_050 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000622_190 0.1193016022 - - PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
3 Hb_000054_010 0.1400080444 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
4 Hb_000482_080 0.1405845054 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
5 Hb_102772_010 0.1484787648 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003020_200 0.1598270184 - - PREDICTED: uncharacterized protein LOC105131117 [Populus euphratica]
7 Hb_000637_100 0.1665145024 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Jatropha curcas]
8 Hb_000362_030 0.1741330081 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
9 Hb_004657_070 0.1791413181 - - PREDICTED: protein IRX15-LIKE [Jatropha curcas]
10 Hb_000165_020 0.180286655 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
11 Hb_004586_440 0.1824748551 - - Blue copper protein precursor, putative [Ricinus communis]
12 Hb_000622_120 0.1833012028 - - hypothetical protein [Hevea brasiliensis]
13 Hb_005914_130 0.1859710648 - - -
14 Hb_000580_210 0.1870718055 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
15 Hb_000645_080 0.1872154354 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
16 Hb_017914_020 0.1874761895 - - -
17 Hb_000236_230 0.1888285343 - - PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Jatropha curcas]
18 Hb_007574_040 0.1895771089 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
19 Hb_001758_090 0.190918759 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
20 Hb_011169_010 0.1937138214 - - mta/sah nucleosidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007311_050 Hb_007311_050 Hb_000622_190 Hb_000622_190 Hb_007311_050--Hb_000622_190 Hb_000054_010 Hb_000054_010 Hb_007311_050--Hb_000054_010 Hb_000482_080 Hb_000482_080 Hb_007311_050--Hb_000482_080 Hb_102772_010 Hb_102772_010 Hb_007311_050--Hb_102772_010 Hb_003020_200 Hb_003020_200 Hb_007311_050--Hb_003020_200 Hb_000637_100 Hb_000637_100 Hb_007311_050--Hb_000637_100 Hb_000622_190--Hb_102772_010 Hb_000608_090 Hb_000608_090 Hb_000622_190--Hb_000608_090 Hb_004586_440 Hb_004586_440 Hb_000622_190--Hb_004586_440 Hb_000622_120 Hb_000622_120 Hb_000622_190--Hb_000622_120 Hb_000362_030 Hb_000362_030 Hb_000622_190--Hb_000362_030 Hb_030565_100 Hb_030565_100 Hb_000054_010--Hb_030565_100 Hb_010883_180 Hb_010883_180 Hb_000054_010--Hb_010883_180 Hb_001186_110 Hb_001186_110 Hb_000054_010--Hb_001186_110 Hb_174541_030 Hb_174541_030 Hb_000054_010--Hb_174541_030 Hb_007574_040 Hb_007574_040 Hb_000054_010--Hb_007574_040 Hb_000482_080--Hb_000362_030 Hb_000580_210 Hb_000580_210 Hb_000482_080--Hb_000580_210 Hb_004657_070 Hb_004657_070 Hb_000482_080--Hb_004657_070 Hb_000482_080--Hb_004586_440 Hb_005183_130 Hb_005183_130 Hb_000482_080--Hb_005183_130 Hb_000482_080--Hb_000608_090 Hb_102772_010--Hb_000622_120 Hb_000995_020 Hb_000995_020 Hb_102772_010--Hb_000995_020 Hb_000622_230 Hb_000622_230 Hb_102772_010--Hb_000622_230 Hb_000115_200 Hb_000115_200 Hb_102772_010--Hb_000115_200 Hb_001433_230 Hb_001433_230 Hb_102772_010--Hb_001433_230 Hb_011169_010 Hb_011169_010 Hb_003020_200--Hb_011169_010 Hb_000617_300 Hb_000617_300 Hb_003020_200--Hb_000617_300 Hb_003020_200--Hb_004657_070 Hb_003020_200--Hb_102772_010 Hb_003020_200--Hb_000622_190 Hb_002759_030 Hb_002759_030 Hb_000637_100--Hb_002759_030 Hb_000637_100--Hb_000622_190 Hb_021596_050 Hb_021596_050 Hb_000637_100--Hb_021596_050 Hb_000637_100--Hb_004586_440 Hb_000030_130 Hb_000030_130 Hb_000637_100--Hb_000030_130 Hb_000599_160 Hb_000599_160 Hb_000637_100--Hb_000599_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.066 9.46491 15.6649 264.665 0.834416 2.5091
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.88781 6.46402 12.8111 2.66311 55.8515

CAGE analysis