Hb_000482_080

Information

Type -
Description -
Location Contig482: 66063-66814
Sequence    

Annotation

kegg
ID pop:POPTR_0018s05260g
description POPTRDRAFT_736896; hypothetical protein
nr
ID XP_012077282.1
description PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KP79
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07666 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44779: 66082-67016
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000482_080 0.0 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
2 Hb_000362_030 0.0962146288 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
3 Hb_000580_210 0.1047374847 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
4 Hb_004657_070 0.1050129195 - - PREDICTED: protein IRX15-LIKE [Jatropha curcas]
5 Hb_004586_440 0.1116293171 - - Blue copper protein precursor, putative [Ricinus communis]
6 Hb_005183_130 0.1184477762 - - glycogenin, putative [Ricinus communis]
7 Hb_000608_090 0.1208999787 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000173_180 0.1251166386 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
9 Hb_006252_070 0.1273262222 - - hypothetical protein JCGZ_17254 [Jatropha curcas]
10 Hb_000645_080 0.1285197483 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
11 Hb_031330_010 0.1328075127 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
12 Hb_071079_040 0.1348797441 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
13 Hb_000339_060 0.1350449725 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
14 Hb_017914_020 0.1364475906 - - -
15 Hb_000991_060 0.1364908763 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
16 Hb_002085_060 0.1374866176 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000645_230 0.1377590828 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
18 Hb_000622_190 0.1381709379 - - PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
19 Hb_007311_050 0.1405845054 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002785_020 0.1407207412 - - PREDICTED: laccase-4-like [Jatropha curcas]

Gene co-expression network

sample Hb_000482_080 Hb_000482_080 Hb_000362_030 Hb_000362_030 Hb_000482_080--Hb_000362_030 Hb_000580_210 Hb_000580_210 Hb_000482_080--Hb_000580_210 Hb_004657_070 Hb_004657_070 Hb_000482_080--Hb_004657_070 Hb_004586_440 Hb_004586_440 Hb_000482_080--Hb_004586_440 Hb_005183_130 Hb_005183_130 Hb_000482_080--Hb_005183_130 Hb_000608_090 Hb_000608_090 Hb_000482_080--Hb_000608_090 Hb_000362_030--Hb_004586_440 Hb_031330_010 Hb_031330_010 Hb_000362_030--Hb_031330_010 Hb_001369_480 Hb_001369_480 Hb_000362_030--Hb_001369_480 Hb_000362_030--Hb_000608_090 Hb_000645_230 Hb_000645_230 Hb_000362_030--Hb_000645_230 Hb_005588_050 Hb_005588_050 Hb_000580_210--Hb_005588_050 Hb_000173_180 Hb_000173_180 Hb_000580_210--Hb_000173_180 Hb_004158_040 Hb_004158_040 Hb_000580_210--Hb_004158_040 Hb_000991_060 Hb_000991_060 Hb_000580_210--Hb_000991_060 Hb_001541_170 Hb_001541_170 Hb_000580_210--Hb_001541_170 Hb_000428_040 Hb_000428_040 Hb_004657_070--Hb_000428_040 Hb_000193_130 Hb_000193_130 Hb_004657_070--Hb_000193_130 Hb_004657_070--Hb_000608_090 Hb_004657_070--Hb_031330_010 Hb_004657_070--Hb_004586_440 Hb_004586_440--Hb_000608_090 Hb_004586_440--Hb_001369_480 Hb_071079_040 Hb_071079_040 Hb_004586_440--Hb_071079_040 Hb_004586_440--Hb_031330_010 Hb_011224_070 Hb_011224_070 Hb_004586_440--Hb_011224_070 Hb_000176_080 Hb_000176_080 Hb_005183_130--Hb_000176_080 Hb_005183_130--Hb_004586_440 Hb_000020_140 Hb_000020_140 Hb_005183_130--Hb_000020_140 Hb_001001_070 Hb_001001_070 Hb_005183_130--Hb_001001_070 Hb_000449_070 Hb_000449_070 Hb_005183_130--Hb_000449_070 Hb_005616_020 Hb_005616_020 Hb_000608_090--Hb_005616_020 Hb_000608_090--Hb_031330_010 Hb_001158_170 Hb_001158_170 Hb_000608_090--Hb_001158_170 Hb_003376_060 Hb_003376_060 Hb_000608_090--Hb_003376_060 Hb_001456_030 Hb_001456_030 Hb_000608_090--Hb_001456_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.09771 25.0244 19.664 550.122 6.41964 3.65667
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.22391 1.50348 8.08422 7.7434 141.513

CAGE analysis