Hb_000173_180

Information

Type -
Description -
Location Contig173: 143343-144205
Sequence    

Annotation

kegg
ID rcu:RCOM_0912370
description ATP binding protein, putative (EC:2.5.1.8)
nr
ID XP_012069518.1
description PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
swissprot
ID Q94ID2
description Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT5 PE=1 SV=2
trembl
ID A0A067L6H5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02098 PE=4 SV=1
Gene Ontology
ID GO:0008033
description adenylate isopentenyltransferase chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000173_180 0.0 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
2 Hb_005588_050 0.10396415 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001722_110 0.1083631852 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
4 Hb_049453_010 0.1094431957 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
5 Hb_000339_060 0.1118359098 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
6 Hb_003638_020 0.1162048181 - - PREDICTED: uncharacterized protein LOC105645807 [Jatropha curcas]
7 Hb_000580_210 0.1170473981 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
8 Hb_002085_060 0.1199867176 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005183_070 0.122025408 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
10 Hb_000362_030 0.1242100842 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
11 Hb_004158_040 0.1249484762 - - PREDICTED: WAT1-related protein At2g37460-like [Jatropha curcas]
12 Hb_000482_080 0.1251166386 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
13 Hb_012787_020 0.1256407392 - - PREDICTED: thioredoxin H7-like [Jatropha curcas]
14 Hb_071079_040 0.127196762 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
15 Hb_000197_260 0.1281462941 - - hypothetical protein PRUPE_ppa025448mg [Prunus persica]
16 Hb_029665_010 0.1311284149 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_005614_020 0.1318439102 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Jatropha curcas]
18 Hb_000645_080 0.1329212701 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
19 Hb_000449_070 0.1354421995 - - unnamed protein product [Vitis vinifera]
20 Hb_000645_230 0.1361305226 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000173_180 Hb_000173_180 Hb_005588_050 Hb_005588_050 Hb_000173_180--Hb_005588_050 Hb_001722_110 Hb_001722_110 Hb_000173_180--Hb_001722_110 Hb_049453_010 Hb_049453_010 Hb_000173_180--Hb_049453_010 Hb_000339_060 Hb_000339_060 Hb_000173_180--Hb_000339_060 Hb_003638_020 Hb_003638_020 Hb_000173_180--Hb_003638_020 Hb_000580_210 Hb_000580_210 Hb_000173_180--Hb_000580_210 Hb_004158_040 Hb_004158_040 Hb_005588_050--Hb_004158_040 Hb_001541_170 Hb_001541_170 Hb_005588_050--Hb_001541_170 Hb_005588_050--Hb_001722_110 Hb_001579_160 Hb_001579_160 Hb_005588_050--Hb_001579_160 Hb_012787_020 Hb_012787_020 Hb_005588_050--Hb_012787_020 Hb_005588_050--Hb_000580_210 Hb_001722_110--Hb_004158_040 Hb_001722_110--Hb_003638_020 Hb_001722_110--Hb_001579_160 Hb_001454_350 Hb_001454_350 Hb_001722_110--Hb_001454_350 Hb_001722_110--Hb_000339_060 Hb_000020_140 Hb_000020_140 Hb_049453_010--Hb_000020_140 Hb_000449_070 Hb_000449_070 Hb_049453_010--Hb_000449_070 Hb_004625_020 Hb_004625_020 Hb_049453_010--Hb_004625_020 Hb_049453_010--Hb_000339_060 Hb_000188_040 Hb_000188_040 Hb_049453_010--Hb_000188_040 Hb_000339_060--Hb_003638_020 Hb_002085_060 Hb_002085_060 Hb_000339_060--Hb_002085_060 Hb_070771_010 Hb_070771_010 Hb_000339_060--Hb_070771_010 Hb_002499_030 Hb_002499_030 Hb_000339_060--Hb_002499_030 Hb_071079_040 Hb_071079_040 Hb_000339_060--Hb_071079_040 Hb_000684_190 Hb_000684_190 Hb_000339_060--Hb_000684_190 Hb_003638_020--Hb_002085_060 Hb_003638_020--Hb_070771_010 Hb_003638_020--Hb_002499_030 Hb_005614_020 Hb_005614_020 Hb_003638_020--Hb_005614_020 Hb_000482_080 Hb_000482_080 Hb_000580_210--Hb_000482_080 Hb_000580_210--Hb_004158_040 Hb_000991_060 Hb_000991_060 Hb_000580_210--Hb_000991_060 Hb_000580_210--Hb_001541_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0312648 0.315655 0.142888 3.36747 0.0879958 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0229619 0.904837

CAGE analysis