Hb_001722_110

Information

Type -
Description -
Location Contig1722: 120542-123175
Sequence    

Annotation

kegg
ID rcu:RCOM_0597560
description DUF26 domain-containing protein 1 precursor, putative
nr
ID XP_002525981.1
description DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
swissprot
ID Q9ZU94
description Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=1 SV=2
trembl
ID B9SJ12
description DUF26 domain-containing protein 1, putative OS=Ricinus communis GN=RCOM_0597560 PE=4 SV=1
Gene Ontology
ID GO:0009506
description cysteine-rich repeat secretory protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16234: 120609-122535 , PASA_asmbl_16235: 119269-120997
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001722_110 0.0 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
2 Hb_004158_040 0.060574548 - - PREDICTED: WAT1-related protein At2g37460-like [Jatropha curcas]
3 Hb_003638_020 0.078167662 - - PREDICTED: uncharacterized protein LOC105645807 [Jatropha curcas]
4 Hb_001579_160 0.078214407 - - PREDICTED: kininogen-1-like [Jatropha curcas]
5 Hb_001454_350 0.0789634175 - - PREDICTED: uncharacterized protein LOC105643449 [Jatropha curcas]
6 Hb_005588_050 0.0836152978 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000339_060 0.0841237332 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
8 Hb_009421_060 0.0846124832 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
9 Hb_071079_040 0.0853859824 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
10 Hb_001712_010 0.0963530072 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
11 Hb_092272_010 0.0973300079 - - -
12 Hb_000497_030 0.0981516141 - - -
13 Hb_021596_050 0.0993848854 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000645_230 0.1001883296 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
15 Hb_000083_200 0.1013588476 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002085_060 0.103534713 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000173_180 0.1083631852 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
18 Hb_001541_170 0.1084485477 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
19 Hb_000599_160 0.1091954545 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
20 Hb_000188_040 0.1095875461 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]

Gene co-expression network

sample Hb_001722_110 Hb_001722_110 Hb_004158_040 Hb_004158_040 Hb_001722_110--Hb_004158_040 Hb_003638_020 Hb_003638_020 Hb_001722_110--Hb_003638_020 Hb_001579_160 Hb_001579_160 Hb_001722_110--Hb_001579_160 Hb_001454_350 Hb_001454_350 Hb_001722_110--Hb_001454_350 Hb_005588_050 Hb_005588_050 Hb_001722_110--Hb_005588_050 Hb_000339_060 Hb_000339_060 Hb_001722_110--Hb_000339_060 Hb_004158_040--Hb_001579_160 Hb_004158_040--Hb_005588_050 Hb_004158_040--Hb_001454_350 Hb_010217_020 Hb_010217_020 Hb_004158_040--Hb_010217_020 Hb_006618_100 Hb_006618_100 Hb_004158_040--Hb_006618_100 Hb_003638_020--Hb_000339_060 Hb_002085_060 Hb_002085_060 Hb_003638_020--Hb_002085_060 Hb_070771_010 Hb_070771_010 Hb_003638_020--Hb_070771_010 Hb_002499_030 Hb_002499_030 Hb_003638_020--Hb_002499_030 Hb_005614_020 Hb_005614_020 Hb_003638_020--Hb_005614_020 Hb_009421_060 Hb_009421_060 Hb_001579_160--Hb_009421_060 Hb_001541_170 Hb_001541_170 Hb_001579_160--Hb_001541_170 Hb_001579_160--Hb_001454_350 Hb_180088_010 Hb_180088_010 Hb_001579_160--Hb_180088_010 Hb_000188_040 Hb_000188_040 Hb_001454_350--Hb_000188_040 Hb_001454_350--Hb_010217_020 Hb_001454_350--Hb_009421_060 Hb_005588_050--Hb_001541_170 Hb_005588_050--Hb_001579_160 Hb_012787_020 Hb_012787_020 Hb_005588_050--Hb_012787_020 Hb_000580_210 Hb_000580_210 Hb_005588_050--Hb_000580_210 Hb_000339_060--Hb_002085_060 Hb_000339_060--Hb_070771_010 Hb_000339_060--Hb_002499_030 Hb_071079_040 Hb_071079_040 Hb_000339_060--Hb_071079_040 Hb_000684_190 Hb_000684_190 Hb_000339_060--Hb_000684_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.073643 2.80948 1.69878 30.9398 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0279087 0 0.256637 7.03

CAGE analysis