Hb_001158_170

Information

Type -
Description -
Location Contig1158: 112073-113421
Sequence    

Annotation

kegg
ID rcu:RCOM_1504910
description hypothetical protein
nr
ID XP_002511128.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9LUE3
description Bidirectional sugar transporter SWEET10 OS=Arabidopsis thaliana GN=SWEET10 PE=2 SV=1
trembl
ID B9RAA3
description Sugar transporter SWEET OS=Ricinus communis GN=RCOM_1504910 PE=3 SV=1
Gene Ontology
ID GO:0005887
description bidirectional sugar transporter sweet10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001158_170 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000964_080 0.0728471481 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
3 Hb_000608_090 0.0811374619 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004846_110 0.0853763727 - - hypothetical protein JCGZ_04591 [Jatropha curcas]
5 Hb_000684_190 0.0861648571 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
6 Hb_000645_230 0.0893111719 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
7 Hb_000422_090 0.0896347866 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005616_020 0.0909458922 - - kinase, putative [Ricinus communis]
9 Hb_004884_040 0.0942093248 - - hypothetical protein POPTR_0016s12910g [Populus trichocarpa]
10 Hb_031330_010 0.0955551573 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
11 Hb_003376_060 0.0961416333 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
12 Hb_002734_020 0.0968516573 - - PREDICTED: uncharacterized protein LOC105631540 [Jatropha curcas]
13 Hb_001856_250 0.0992262441 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
14 Hb_011912_010 0.0992989784 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
15 Hb_012114_090 0.0993373632 - - tubulin beta chain, putative [Ricinus communis]
16 Hb_000483_340 0.0994008979 - - conserved hypothetical protein [Ricinus communis]
17 Hb_070771_010 0.1004804775 - - PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
18 Hb_000413_030 0.101838645 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
19 Hb_001456_030 0.1021982539 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
20 Hb_001307_180 0.1048574292 - - PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming] isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001158_170 Hb_001158_170 Hb_000964_080 Hb_000964_080 Hb_001158_170--Hb_000964_080 Hb_000608_090 Hb_000608_090 Hb_001158_170--Hb_000608_090 Hb_004846_110 Hb_004846_110 Hb_001158_170--Hb_004846_110 Hb_000684_190 Hb_000684_190 Hb_001158_170--Hb_000684_190 Hb_000645_230 Hb_000645_230 Hb_001158_170--Hb_000645_230 Hb_000422_090 Hb_000422_090 Hb_001158_170--Hb_000422_090 Hb_000413_030 Hb_000413_030 Hb_000964_080--Hb_000413_030 Hb_003376_060 Hb_003376_060 Hb_000964_080--Hb_003376_060 Hb_000964_080--Hb_004846_110 Hb_011912_010 Hb_011912_010 Hb_000964_080--Hb_011912_010 Hb_000037_150 Hb_000037_150 Hb_000964_080--Hb_000037_150 Hb_005616_020 Hb_005616_020 Hb_000608_090--Hb_005616_020 Hb_031330_010 Hb_031330_010 Hb_000608_090--Hb_031330_010 Hb_004586_440 Hb_004586_440 Hb_000608_090--Hb_004586_440 Hb_000608_090--Hb_003376_060 Hb_001456_030 Hb_001456_030 Hb_000608_090--Hb_001456_030 Hb_004846_110--Hb_000037_150 Hb_004846_110--Hb_011912_010 Hb_001307_180 Hb_001307_180 Hb_004846_110--Hb_001307_180 Hb_002660_180 Hb_002660_180 Hb_004846_110--Hb_002660_180 Hb_004846_110--Hb_000413_030 Hb_000684_190--Hb_000645_230 Hb_002785_020 Hb_002785_020 Hb_000684_190--Hb_002785_020 Hb_001935_200 Hb_001935_200 Hb_000684_190--Hb_001935_200 Hb_000684_190--Hb_000422_090 Hb_004884_040 Hb_004884_040 Hb_000684_190--Hb_004884_040 Hb_002734_020 Hb_002734_020 Hb_000684_190--Hb_002734_020 Hb_000645_230--Hb_002785_020 Hb_000645_230--Hb_031330_010 Hb_000645_230--Hb_004884_040 Hb_000645_230--Hb_002734_020 Hb_000483_340 Hb_000483_340 Hb_000645_230--Hb_000483_340 Hb_002636_170 Hb_002636_170 Hb_000422_090--Hb_002636_170 Hb_000696_130 Hb_000696_130 Hb_000422_090--Hb_000696_130 Hb_000422_090--Hb_002660_180 Hb_000422_090--Hb_002734_020 Hb_001856_250 Hb_001856_250 Hb_000422_090--Hb_001856_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0456768 0.124307 2.10344 0.0273952 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.696553

CAGE analysis