Hb_001856_250

Information

Type -
Description -
Location Contig1856: 303408-309903
Sequence    

Annotation

kegg
ID rcu:RCOM_1026730
description Anthocyanin 5-aromatic acyltransferase, putative (EC:2.3.1.153)
nr
ID XP_012084863.1
description PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
swissprot
ID Q9LJB4
description Malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase OS=Arabidopsis thaliana GN=5MAT PE=1 SV=1
trembl
ID A0A067JTI5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19955 PE=4 SV=1
Gene Ontology
ID GO:0016747
description phenolic glucoside malonyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18185: 303916-304203 , PASA_asmbl_18186: 304720-304897
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001856_250 0.0 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
2 Hb_000483_340 0.0290348336 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002734_020 0.0328225152 - - PREDICTED: uncharacterized protein LOC105631540 [Jatropha curcas]
4 Hb_004884_040 0.0424071807 - - hypothetical protein POPTR_0016s12910g [Populus trichocarpa]
5 Hb_027577_010 0.0584302867 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]
6 Hb_006651_020 0.0596029472 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
7 Hb_000729_040 0.0605359552 - - xyloglucan endotransglucosylase/hydrolase protein 10 precursor [Populus trichocarpa]
8 Hb_000422_090 0.0621376131 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000487_350 0.062560423 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000997_220 0.0633588752 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas]
11 Hb_004030_040 0.0650443258 - - PREDICTED: protein NRT1/ PTR FAMILY 2.8 [Jatropha curcas]
12 Hb_000581_010 0.0675682067 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
13 Hb_002757_030 0.0717495494 - - unnamed protein product [Vitis vinifera]
14 Hb_031330_010 0.0725633519 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
15 Hb_000645_230 0.0756299929 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
16 Hb_000318_500 0.0768067554 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010833_010 0.0776929456 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
18 Hb_002785_020 0.0777227924 - - PREDICTED: laccase-4-like [Jatropha curcas]
19 Hb_000684_190 0.078768096 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
20 Hb_153544_020 0.0812227458 transcription factor TF Family: TCP PREDICTED: transcription factor TCP12 [Jatropha curcas]

Gene co-expression network

sample Hb_001856_250 Hb_001856_250 Hb_000483_340 Hb_000483_340 Hb_001856_250--Hb_000483_340 Hb_002734_020 Hb_002734_020 Hb_001856_250--Hb_002734_020 Hb_004884_040 Hb_004884_040 Hb_001856_250--Hb_004884_040 Hb_027577_010 Hb_027577_010 Hb_001856_250--Hb_027577_010 Hb_006651_020 Hb_006651_020 Hb_001856_250--Hb_006651_020 Hb_000729_040 Hb_000729_040 Hb_001856_250--Hb_000729_040 Hb_000483_340--Hb_004884_040 Hb_000483_340--Hb_002734_020 Hb_031330_010 Hb_031330_010 Hb_000483_340--Hb_031330_010 Hb_000997_220 Hb_000997_220 Hb_000483_340--Hb_000997_220 Hb_000645_230 Hb_000645_230 Hb_000483_340--Hb_000645_230 Hb_002734_020--Hb_004884_040 Hb_000422_090 Hb_000422_090 Hb_002734_020--Hb_000422_090 Hb_002785_020 Hb_002785_020 Hb_002734_020--Hb_002785_020 Hb_002734_020--Hb_000645_230 Hb_000318_500 Hb_000318_500 Hb_004884_040--Hb_000318_500 Hb_004884_040--Hb_000645_230 Hb_004884_040--Hb_031330_010 Hb_180518_010 Hb_180518_010 Hb_027577_010--Hb_180518_010 Hb_000487_350 Hb_000487_350 Hb_027577_010--Hb_000487_350 Hb_000581_010 Hb_000581_010 Hb_027577_010--Hb_000581_010 Hb_027577_010--Hb_000729_040 Hb_027577_010--Hb_000483_340 Hb_004030_040 Hb_004030_040 Hb_006651_020--Hb_004030_040 Hb_153544_020 Hb_153544_020 Hb_006651_020--Hb_153544_020 Hb_002757_030 Hb_002757_030 Hb_006651_020--Hb_002757_030 Hb_010833_010 Hb_010833_010 Hb_006651_020--Hb_010833_010 Hb_003754_010 Hb_003754_010 Hb_006651_020--Hb_003754_010 Hb_000729_040--Hb_000487_350 Hb_000729_040--Hb_000581_010 Hb_000462_120 Hb_000462_120 Hb_000729_040--Hb_000462_120 Hb_000729_040--Hb_000483_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0818985 0.494329 10.9073 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0144642 2.6416

CAGE analysis