Hb_002119_140

Information

Type -
Description -
Location Contig2119: 193712-195606
Sequence    

Annotation

kegg
ID rcu:RCOM_1150250
description oxidoreductase, putative
nr
ID XP_012072375.1
description PREDICTED: uncharacterized protein LOC105634172 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPN6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04814 PE=4 SV=1
Gene Ontology
ID GO:0016705
description isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002119_140 0.0 - - PREDICTED: uncharacterized protein LOC105634172 [Jatropha curcas]
2 Hb_002150_100 0.1973098027 - - PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Jatropha curcas]
3 Hb_001221_450 0.2055936064 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000099_140 0.2268680625 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
5 Hb_002374_410 0.2331037426 - - zinc finger protein, putative [Ricinus communis]
6 Hb_007574_040 0.2410259409 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
7 Hb_022092_080 0.2449351052 - - -
8 Hb_001758_090 0.2493204024 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
9 Hb_003055_100 0.2500430538 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
10 Hb_000115_200 0.253195574 - - PREDICTED: endonuclease 2 [Jatropha curcas]
11 Hb_002289_140 0.2545849044 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000622_120 0.2556730544 - - hypothetical protein [Hevea brasiliensis]
13 Hb_001584_270 0.257774283 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003813_010 0.2621285293 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
15 Hb_000005_140 0.2645224803 transcription factor TF Family: C2H2 unknown [Populus trichocarpa]
16 Hb_000925_060 0.2670594361 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 9-like [Jatropha curcas]
17 Hb_010457_040 0.2678446905 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
18 Hb_000617_300 0.2747235176 - - RALFL33, putative [Ricinus communis]
19 Hb_009662_070 0.2748904469 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
20 Hb_029622_040 0.2752012457 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002119_140 Hb_002119_140 Hb_002150_100 Hb_002150_100 Hb_002119_140--Hb_002150_100 Hb_001221_450 Hb_001221_450 Hb_002119_140--Hb_001221_450 Hb_000099_140 Hb_000099_140 Hb_002119_140--Hb_000099_140 Hb_002374_410 Hb_002374_410 Hb_002119_140--Hb_002374_410 Hb_007574_040 Hb_007574_040 Hb_002119_140--Hb_007574_040 Hb_022092_080 Hb_022092_080 Hb_002119_140--Hb_022092_080 Hb_003411_120 Hb_003411_120 Hb_002150_100--Hb_003411_120 Hb_010457_040 Hb_010457_040 Hb_002150_100--Hb_010457_040 Hb_001097_080 Hb_001097_080 Hb_002150_100--Hb_001097_080 Hb_005914_130 Hb_005914_130 Hb_002150_100--Hb_005914_130 Hb_001758_090 Hb_001758_090 Hb_002150_100--Hb_001758_090 Hb_001221_450--Hb_002374_410 Hb_000398_070 Hb_000398_070 Hb_001221_450--Hb_000398_070 Hb_001894_020 Hb_001894_020 Hb_001221_450--Hb_001894_020 Hb_000103_070 Hb_000103_070 Hb_001221_450--Hb_000103_070 Hb_001584_270 Hb_001584_270 Hb_001221_450--Hb_001584_270 Hb_053272_010 Hb_053272_010 Hb_000099_140--Hb_053272_010 Hb_000005_140 Hb_000005_140 Hb_000099_140--Hb_000005_140 Hb_069338_010 Hb_069338_010 Hb_000099_140--Hb_069338_010 Hb_002876_340 Hb_002876_340 Hb_000099_140--Hb_002876_340 Hb_000099_140--Hb_022092_080 Hb_000622_120 Hb_000622_120 Hb_002374_410--Hb_000622_120 Hb_000622_230 Hb_000622_230 Hb_002374_410--Hb_000622_230 Hb_011671_350 Hb_011671_350 Hb_002374_410--Hb_011671_350 Hb_002374_410--Hb_007574_040 Hb_000054_010 Hb_000054_010 Hb_002374_410--Hb_000054_010 Hb_000297_140 Hb_000297_140 Hb_007574_040--Hb_000297_140 Hb_008695_220 Hb_008695_220 Hb_007574_040--Hb_008695_220 Hb_007574_040--Hb_000054_010 Hb_007574_040--Hb_000622_120 Hb_002759_030 Hb_002759_030 Hb_007574_040--Hb_002759_030 Hb_000622_190 Hb_000622_190 Hb_007574_040--Hb_000622_190 Hb_007229_080 Hb_007229_080 Hb_022092_080--Hb_007229_080 Hb_077731_030 Hb_077731_030 Hb_022092_080--Hb_077731_030 Hb_143766_070 Hb_143766_070 Hb_022092_080--Hb_143766_070 Hb_002592_020 Hb_002592_020 Hb_022092_080--Hb_002592_020 Hb_001989_030 Hb_001989_030 Hb_022092_080--Hb_001989_030 Hb_000959_320 Hb_000959_320 Hb_022092_080--Hb_000959_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0778742 0.754938 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.186396 0 0.0769856 0.177039

CAGE analysis