Hb_143766_070

Information

Type -
Description -
Location Contig143766: 44619-46954
Sequence    

Annotation

kegg
ID rcu:RCOM_1048220
description histone acetyltransferase type B catalytic subunit, putative (EC:2.3.1.48)
nr
ID XP_012076804.1
description PREDICTED: histone acetyltransferase type B catalytic subunit [Jatropha curcas]
swissprot
ID Q9FJT8
description Histone acetyltransferase type B catalytic subunit OS=Arabidopsis thaliana GN=HAG2 PE=2 SV=1
trembl
ID A0A067KFL1
description Histone acetyltransferase OS=Jatropha curcas GN=JCGZ_07324 PE=3 SV=1
Gene Ontology
ID GO:0004402
description histone acetyltransferase type b catalytic subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143766_070 0.0 - - PREDICTED: histone acetyltransferase type B catalytic subunit [Jatropha curcas]
2 Hb_000057_100 0.1623143018 - - Peroxidase 57 precursor, putative [Ricinus communis]
3 Hb_004881_070 0.1633002978 - - ATP binding protein, putative [Ricinus communis]
4 Hb_004374_160 0.1663374369 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
5 Hb_003052_020 0.17217 - - PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_000635_100 0.1781709452 - - -
7 Hb_000639_010 0.1790504172 transcription factor TF Family: ERF hypothetical protein JCGZ_09727 [Jatropha curcas]
8 Hb_077731_030 0.1796942657 - - sterol desaturase, putative [Ricinus communis]
9 Hb_032572_010 0.1823921421 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
10 Hb_001488_350 0.1887470297 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009767_060 0.1919551919 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
12 Hb_007229_080 0.1940039056 - - Nonspecific lipid-transfer protein A, putative [Ricinus communis]
13 Hb_001958_010 0.1941627024 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
14 Hb_162174_010 0.1982172515 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
15 Hb_000120_940 0.1999957949 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
16 Hb_010264_020 0.2001023603 - - unnamed protein product [Vitis vinifera]
17 Hb_000189_180 0.2012579312 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
18 Hb_000941_110 0.2020019126 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
19 Hb_000003_210 0.202607623 - - PREDICTED: GEM-like protein 4 [Jatropha curcas]
20 Hb_001277_010 0.2029906462 - - unknown [Populus trichocarpa]

Gene co-expression network

sample Hb_143766_070 Hb_143766_070 Hb_000057_100 Hb_000057_100 Hb_143766_070--Hb_000057_100 Hb_004881_070 Hb_004881_070 Hb_143766_070--Hb_004881_070 Hb_004374_160 Hb_004374_160 Hb_143766_070--Hb_004374_160 Hb_003052_020 Hb_003052_020 Hb_143766_070--Hb_003052_020 Hb_000635_100 Hb_000635_100 Hb_143766_070--Hb_000635_100 Hb_000639_010 Hb_000639_010 Hb_143766_070--Hb_000639_010 Hb_117639_010 Hb_117639_010 Hb_000057_100--Hb_117639_010 Hb_000946_070 Hb_000946_070 Hb_000057_100--Hb_000946_070 Hb_001488_350 Hb_001488_350 Hb_000057_100--Hb_001488_350 Hb_008143_040 Hb_008143_040 Hb_000057_100--Hb_008143_040 Hb_000181_220 Hb_000181_220 Hb_000057_100--Hb_000181_220 Hb_162174_010 Hb_162174_010 Hb_004881_070--Hb_162174_010 Hb_000621_030 Hb_000621_030 Hb_004881_070--Hb_000621_030 Hb_004881_070--Hb_004374_160 Hb_001541_130 Hb_001541_130 Hb_004881_070--Hb_001541_130 Hb_001516_010 Hb_001516_010 Hb_004881_070--Hb_001516_010 Hb_000816_240 Hb_000816_240 Hb_004881_070--Hb_000816_240 Hb_004374_160--Hb_001488_350 Hb_039435_010 Hb_039435_010 Hb_004374_160--Hb_039435_010 Hb_004374_160--Hb_000621_030 Hb_002817_050 Hb_002817_050 Hb_004374_160--Hb_002817_050 Hb_005493_010 Hb_005493_010 Hb_004374_160--Hb_005493_010 Hb_003052_020--Hb_004374_160 Hb_003052_020--Hb_001488_350 Hb_003052_020--Hb_039435_010 Hb_000926_050 Hb_000926_050 Hb_003052_020--Hb_000926_050 Hb_003052_020--Hb_004881_070 Hb_001430_040 Hb_001430_040 Hb_000635_100--Hb_001430_040 Hb_003968_030 Hb_003968_030 Hb_000635_100--Hb_003968_030 Hb_000635_100--Hb_000639_010 Hb_000186_150 Hb_000186_150 Hb_000635_100--Hb_000186_150 Hb_010264_020 Hb_010264_020 Hb_000635_100--Hb_010264_020 Hb_001277_010 Hb_001277_010 Hb_000635_100--Hb_001277_010 Hb_168561_010 Hb_168561_010 Hb_000639_010--Hb_168561_010 Hb_000639_010--Hb_001277_010 Hb_006499_020 Hb_006499_020 Hb_000639_010--Hb_006499_020 Hb_007101_140 Hb_007101_140 Hb_000639_010--Hb_007101_140 Hb_032572_010 Hb_032572_010 Hb_000639_010--Hb_032572_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.172668 0.281119 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0408219 0 0.0821205 0.16679

CAGE analysis