Hb_011671_350

Information

Type -
Description -
Location Contig11671: 292203-292712
Sequence    

Annotation

kegg
ID rcu:RCOM_1502400
description hypothetical protein
nr
ID XP_012090512.1
description PREDICTED: uncharacterized protein LOC105648659 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEZ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26307 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011671_350 0.0 - - PREDICTED: uncharacterized protein LOC105648659 [Jatropha curcas]
2 Hb_001153_040 0.1894954282 - - PREDICTED: uncharacterized protein LOC105128973 [Populus euphratica]
3 Hb_000389_040 0.2036303871 - - PREDICTED: BTB/POZ domain-containing protein At5g03250-like [Jatropha curcas]
4 Hb_103942_030 0.2054848049 - - protein with unknown function [Ricinus communis]
5 Hb_002374_410 0.2137010435 - - zinc finger protein, putative [Ricinus communis]
6 Hb_000995_020 0.2166074326 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000963_210 0.2171313737 - - structural constituent of cell wall, putative [Ricinus communis]
8 Hb_000152_730 0.2183225602 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002783_280 0.2205373551 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
10 Hb_000462_070 0.2269010531 - - PREDICTED: probable pectinesterase 15 [Jatropha curcas]
11 Hb_000622_230 0.2275489586 - - PREDICTED: uncharacterized protein LOC105642895 [Jatropha curcas]
12 Hb_000413_120 0.227725454 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
13 Hb_000622_120 0.2306240956 - - hypothetical protein [Hevea brasiliensis]
14 Hb_102772_010 0.2311520883 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002811_070 0.231541566 - - Cytidine/deoxycytidylate deaminase family protein isoform 1 [Theobroma cacao]
16 Hb_000155_030 0.2343492441 - - PREDICTED: uncharacterized protein LOC105649591 [Jatropha curcas]
17 Hb_000011_250 0.2373390132 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
18 Hb_010883_180 0.2392804517 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
19 Hb_000164_010 0.2402179998 - - small heat-shock protein, putative [Ricinus communis]
20 Hb_116349_080 0.2408865722 - - Nectarin-1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_011671_350 Hb_011671_350 Hb_001153_040 Hb_001153_040 Hb_011671_350--Hb_001153_040 Hb_000389_040 Hb_000389_040 Hb_011671_350--Hb_000389_040 Hb_103942_030 Hb_103942_030 Hb_011671_350--Hb_103942_030 Hb_002374_410 Hb_002374_410 Hb_011671_350--Hb_002374_410 Hb_000995_020 Hb_000995_020 Hb_011671_350--Hb_000995_020 Hb_000963_210 Hb_000963_210 Hb_011671_350--Hb_000963_210 Hb_048476_130 Hb_048476_130 Hb_001153_040--Hb_048476_130 Hb_017908_010 Hb_017908_010 Hb_001153_040--Hb_017908_010 Hb_004933_010 Hb_004933_010 Hb_001153_040--Hb_004933_010 Hb_000413_120 Hb_000413_120 Hb_001153_040--Hb_000413_120 Hb_006483_070 Hb_006483_070 Hb_001153_040--Hb_006483_070 Hb_000742_290 Hb_000742_290 Hb_001153_040--Hb_000742_290 Hb_000389_040--Hb_103942_030 Hb_000389_040--Hb_000995_020 Hb_133279_010 Hb_133279_010 Hb_000389_040--Hb_133279_010 Hb_011861_090 Hb_011861_090 Hb_000389_040--Hb_011861_090 Hb_010883_180 Hb_010883_180 Hb_000389_040--Hb_010883_180 Hb_102772_010 Hb_102772_010 Hb_000389_040--Hb_102772_010 Hb_002893_030 Hb_002893_030 Hb_103942_030--Hb_002893_030 Hb_103942_030--Hb_010883_180 Hb_000260_110 Hb_000260_110 Hb_103942_030--Hb_000260_110 Hb_004007_070 Hb_004007_070 Hb_103942_030--Hb_004007_070 Hb_000086_090 Hb_000086_090 Hb_103942_030--Hb_000086_090 Hb_001221_450 Hb_001221_450 Hb_002374_410--Hb_001221_450 Hb_000622_120 Hb_000622_120 Hb_002374_410--Hb_000622_120 Hb_000622_230 Hb_000622_230 Hb_002374_410--Hb_000622_230 Hb_007574_040 Hb_007574_040 Hb_002374_410--Hb_007574_040 Hb_000054_010 Hb_000054_010 Hb_002374_410--Hb_000054_010 Hb_000995_020--Hb_102772_010 Hb_000995_020--Hb_000622_230 Hb_000995_020--Hb_000622_120 Hb_006816_060 Hb_006816_060 Hb_000995_020--Hb_006816_060 Hb_003371_030 Hb_003371_030 Hb_000995_020--Hb_003371_030 Hb_000617_300 Hb_000617_300 Hb_000995_020--Hb_000617_300 Hb_002309_020 Hb_002309_020 Hb_000963_210--Hb_002309_020 Hb_000317_380 Hb_000317_380 Hb_000963_210--Hb_000317_380 Hb_002092_060 Hb_002092_060 Hb_000963_210--Hb_002092_060 Hb_000005_290 Hb_000005_290 Hb_000963_210--Hb_000005_290 Hb_002686_220 Hb_002686_220 Hb_000963_210--Hb_002686_220 Hb_001975_110 Hb_001975_110 Hb_000963_210--Hb_001975_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.146054 0.60883 2.91869 0.0843227 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.155037 0.248517 0 0.272949

CAGE analysis