Hb_092706_010

Information

Type -
Description -
Location Contig92706: 407-1609
Sequence    

Annotation

kegg
ID rcu:RCOM_1046800
description beta-galactosidase, putative (EC:3.2.1.23)
nr
ID XP_012076925.1
description PREDICTED: beta-galactosidase-like [Jatropha curcas]
swissprot
ID P48980
description Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1
trembl
ID A0A067KC92
description Beta-galactosidase OS=Jatropha curcas GN=JCGZ_07402 PE=3 SV=1
Gene Ontology
ID GO:0004565
description beta-galactosidase-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092706_010 0.0 - - PREDICTED: beta-galactosidase-like [Jatropha curcas]
2 Hb_185298_010 0.2453718163 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]
3 Hb_010883_120 0.2493857631 - - -
4 Hb_002631_280 0.2500176752 - - PREDICTED: ubiquitin isoform X2 [Eucalyptus grandis]
5 Hb_005144_010 0.2530458695 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
6 Hb_018279_020 0.2566946587 - - hypothetical protein JCGZ_03682 [Jatropha curcas]
7 Hb_000365_250 0.2602572421 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000111_030 0.2602964119 - - PREDICTED: uncharacterized protein LOC104094030 [Nicotiana tomentosiformis]
9 Hb_005784_040 0.2624165499 - - PREDICTED: uncharacterized protein LOC105645160 isoform X1 [Jatropha curcas]
10 Hb_015941_050 0.2649844218 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002217_460 0.267803333 - - PREDICTED: transcription factor bHLH147-like [Jatropha curcas]
12 Hb_000384_070 0.2682544266 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007926_050 0.2688021447 - - PREDICTED: probable CCR4-associated factor 1 homolog 11 [Jatropha curcas]
14 Hb_001824_040 0.2694489305 - - hypothetical protein M569_11359, partial [Genlisea aurea]
15 Hb_001386_110 0.2695103662 - - PREDICTED: LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 [Populus euphratica]
16 Hb_000003_540 0.2707123022 - - PREDICTED: homeobox-leucine zipper protein ATHB-15 [Jatropha curcas]
17 Hb_002205_170 0.2709863385 - - PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
18 Hb_004230_020 0.2710384773 - - PREDICTED: uncharacterized protein LOC105648105 [Jatropha curcas]
19 Hb_001189_040 0.2730154271 - - hypothetical protein POPTR_0014s10420g [Populus trichocarpa]
20 Hb_001322_070 0.273970907 - - protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_092706_010 Hb_092706_010 Hb_185298_010 Hb_185298_010 Hb_092706_010--Hb_185298_010 Hb_010883_120 Hb_010883_120 Hb_092706_010--Hb_010883_120 Hb_002631_280 Hb_002631_280 Hb_092706_010--Hb_002631_280 Hb_005144_010 Hb_005144_010 Hb_092706_010--Hb_005144_010 Hb_018279_020 Hb_018279_020 Hb_092706_010--Hb_018279_020 Hb_000365_250 Hb_000365_250 Hb_092706_010--Hb_000365_250 Hb_003414_050 Hb_003414_050 Hb_185298_010--Hb_003414_050 Hb_000406_080 Hb_000406_080 Hb_185298_010--Hb_000406_080 Hb_181385_010 Hb_181385_010 Hb_185298_010--Hb_181385_010 Hb_185298_010--Hb_000365_250 Hb_002983_050 Hb_002983_050 Hb_185298_010--Hb_002983_050 Hb_000264_360 Hb_000264_360 Hb_185298_010--Hb_000264_360 Hb_004976_070 Hb_004976_070 Hb_010883_120--Hb_004976_070 Hb_000329_340 Hb_000329_340 Hb_010883_120--Hb_000329_340 Hb_001366_140 Hb_001366_140 Hb_010883_120--Hb_001366_140 Hb_010883_120--Hb_185298_010 Hb_000028_100 Hb_000028_100 Hb_010883_120--Hb_000028_100 Hb_001123_060 Hb_001123_060 Hb_010883_120--Hb_001123_060 Hb_005784_040 Hb_005784_040 Hb_002631_280--Hb_005784_040 Hb_000003_540 Hb_000003_540 Hb_002631_280--Hb_000003_540 Hb_000384_070 Hb_000384_070 Hb_002631_280--Hb_000384_070 Hb_000538_240 Hb_000538_240 Hb_002631_280--Hb_000538_240 Hb_011671_480 Hb_011671_480 Hb_002631_280--Hb_011671_480 Hb_000086_170 Hb_000086_170 Hb_002631_280--Hb_000086_170 Hb_012340_050 Hb_012340_050 Hb_005144_010--Hb_012340_050 Hb_005144_010--Hb_000365_250 Hb_002314_010 Hb_002314_010 Hb_005144_010--Hb_002314_010 Hb_000107_300 Hb_000107_300 Hb_005144_010--Hb_000107_300 Hb_045003_010 Hb_045003_010 Hb_005144_010--Hb_045003_010 Hb_145880_020 Hb_145880_020 Hb_005144_010--Hb_145880_020 Hb_001862_120 Hb_001862_120 Hb_018279_020--Hb_001862_120 Hb_002226_040 Hb_002226_040 Hb_018279_020--Hb_002226_040 Hb_001832_150 Hb_001832_150 Hb_018279_020--Hb_001832_150 Hb_000224_200 Hb_000224_200 Hb_018279_020--Hb_000224_200 Hb_003206_120 Hb_003206_120 Hb_018279_020--Hb_003206_120 Hb_018279_020--Hb_000003_540 Hb_000066_090 Hb_000066_090 Hb_000365_250--Hb_000066_090 Hb_000365_250--Hb_012340_050 Hb_000638_170 Hb_000638_170 Hb_000365_250--Hb_000638_170 Hb_002105_100 Hb_002105_100 Hb_000365_250--Hb_002105_100 Hb_000365_250--Hb_000107_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.261215 2.52267 0.773629 7.56909 2.87824 0.702734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.13389 6.58817 0.720149 0.660499 1.79886

CAGE analysis