Hb_011671_480

Information

Type -
Description -
Location Contig11671: 364409-364651
Sequence    

Annotation

kegg
ID rcu:RCOM_1502640
description hypothetical protein
nr
ID XP_002511035.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RA10
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1502640 PE=4 SV=1
Gene Ontology
ID GO:0016021
description mitochondrial import inner membrane translocase subunit tim17 tim22 tim23 family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011671_480 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001829_040 0.0912462859 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
3 Hb_000538_240 0.1057915267 - - PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]
4 Hb_001911_040 0.1065220847 - - PREDICTED: uncharacterized protein LOC105628407 [Jatropha curcas]
5 Hb_000260_720 0.1083556756 - - PREDICTED: ADP-ribosylation factor-like, partial [Nicotiana tomentosiformis]
6 Hb_002983_080 0.1109834866 - - acetylornithine aminotransferase, partial [Prunus persica]
7 Hb_000331_090 0.1131262607 - - hypothetical protein PRUPE_ppa010923mg [Prunus persica]
8 Hb_002631_280 0.1150274959 - - PREDICTED: ubiquitin isoform X2 [Eucalyptus grandis]
9 Hb_162060_010 0.1157281672 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005535_080 0.1159758315 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
11 Hb_000096_120 0.1203351249 - - PREDICTED: uncharacterized protein LOC105639993 [Jatropha curcas]
12 Hb_005686_120 0.1227462106 - - -
13 Hb_002869_050 0.1232316362 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
14 Hb_000086_170 0.1236324491 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
15 Hb_005463_050 0.1237549849 - - PREDICTED: uncharacterized protein LOC105632514 [Jatropha curcas]
16 Hb_124373_010 0.1239327857 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
17 Hb_010789_020 0.1247087963 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
18 Hb_001405_210 0.1247871281 - - hypothetical protein JCGZ_22540 [Jatropha curcas]
19 Hb_000913_040 0.1263152497 - - Methyltransferase-related protein, putative [Theobroma cacao]
20 Hb_000580_100 0.126569613 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_011671_480 Hb_011671_480 Hb_001829_040 Hb_001829_040 Hb_011671_480--Hb_001829_040 Hb_000538_240 Hb_000538_240 Hb_011671_480--Hb_000538_240 Hb_001911_040 Hb_001911_040 Hb_011671_480--Hb_001911_040 Hb_000260_720 Hb_000260_720 Hb_011671_480--Hb_000260_720 Hb_002983_080 Hb_002983_080 Hb_011671_480--Hb_002983_080 Hb_000331_090 Hb_000331_090 Hb_011671_480--Hb_000331_090 Hb_000022_050 Hb_000022_050 Hb_001829_040--Hb_000022_050 Hb_001829_040--Hb_002983_080 Hb_001829_040--Hb_000260_720 Hb_005686_120 Hb_005686_120 Hb_001829_040--Hb_005686_120 Hb_000261_230 Hb_000261_230 Hb_001829_040--Hb_000261_230 Hb_005463_050 Hb_005463_050 Hb_000538_240--Hb_005463_050 Hb_002232_040 Hb_002232_040 Hb_000538_240--Hb_002232_040 Hb_002631_280 Hb_002631_280 Hb_000538_240--Hb_002631_280 Hb_001221_220 Hb_001221_220 Hb_000538_240--Hb_001221_220 Hb_000538_240--Hb_001911_040 Hb_009545_090 Hb_009545_090 Hb_001911_040--Hb_009545_090 Hb_000743_030 Hb_000743_030 Hb_001911_040--Hb_000743_030 Hb_001911_040--Hb_001829_040 Hb_000357_110 Hb_000357_110 Hb_001911_040--Hb_000357_110 Hb_003342_020 Hb_003342_020 Hb_000260_720--Hb_003342_020 Hb_005535_080 Hb_005535_080 Hb_000260_720--Hb_005535_080 Hb_004055_120 Hb_004055_120 Hb_000260_720--Hb_004055_120 Hb_000107_230 Hb_000107_230 Hb_000260_720--Hb_000107_230 Hb_001405_210 Hb_001405_210 Hb_002983_080--Hb_001405_210 Hb_122548_010 Hb_122548_010 Hb_002983_080--Hb_122548_010 Hb_015026_130 Hb_015026_130 Hb_002983_080--Hb_015026_130 Hb_004102_170 Hb_004102_170 Hb_002983_080--Hb_004102_170 Hb_005381_020 Hb_005381_020 Hb_002983_080--Hb_005381_020 Hb_000046_570 Hb_000046_570 Hb_002983_080--Hb_000046_570 Hb_000207_150 Hb_000207_150 Hb_000331_090--Hb_000207_150 Hb_001959_110 Hb_001959_110 Hb_000331_090--Hb_001959_110 Hb_163175_010 Hb_163175_010 Hb_000331_090--Hb_163175_010 Hb_000331_090--Hb_001405_210 Hb_000720_040 Hb_000720_040 Hb_000331_090--Hb_000720_040 Hb_000331_090--Hb_000107_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.444 29.6363 37.4441 59.7862 20.0828 27.6691
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.536 32.7409 11.568 18.7214 11.6196

CAGE analysis