Hb_185298_010

Information

Type -
Description -
Location Contig185298: 52-744
Sequence    

Annotation

kegg
ID rcu:RCOM_1032390
description biotin protein ligase, putative (EC:6.3.4.15)
nr
ID XP_012078166.1
description PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]
swissprot
ID F4I4W2
description Biotin--protein ligase 2 OS=Arabidopsis thaliana GN=HCS2 PE=2 SV=1
trembl
ID A0A067KKH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12047 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185298_010 0.0 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]
2 Hb_003414_050 0.1434664744 - - PREDICTED: uncharacterized protein LOC105640180 isoform X3 [Jatropha curcas]
3 Hb_000406_080 0.1563314443 - - PREDICTED: trafficking protein particle complex subunit 6B [Jatropha curcas]
4 Hb_181385_010 0.1563929662 - - PREDICTED: uncharacterized protein LOC105650319 [Jatropha curcas]
5 Hb_000365_250 0.1575967526 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002983_050 0.1621560448 - - PREDICTED: acetylornithine aminotransferase, mitochondrial [Jatropha curcas]
7 Hb_000264_360 0.1628564316 - - hypothetical protein JCGZ_21443 [Jatropha curcas]
8 Hb_001366_140 0.1642316884 - - hypothetical protein POPTR_0014s10420g [Populus trichocarpa]
9 Hb_029388_030 0.1676141077 - - PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]
10 Hb_000561_020 0.168233124 - - hypothetical protein JCGZ_19196 [Jatropha curcas]
11 Hb_000696_290 0.1697549273 - - PREDICTED: UPF0664 stress-induced protein C29B12.11c [Jatropha curcas]
12 Hb_005784_040 0.1712248264 - - PREDICTED: uncharacterized protein LOC105645160 isoform X1 [Jatropha curcas]
13 Hb_010174_020 0.1721418693 - - protein binding protein, putative [Ricinus communis]
14 Hb_005278_020 0.1731925429 - - PREDICTED: sorcin-like [Jatropha curcas]
15 Hb_022318_010 0.1733893235 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000483_390 0.1734194838 - - PREDICTED: vesicle-associated protein 2-1 [Jatropha curcas]
17 Hb_000417_040 0.1736972721 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
18 Hb_003671_020 0.1737082468 - - calcineurin B, putative [Ricinus communis]
19 Hb_011381_080 0.1742767796 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
20 Hb_000329_340 0.175350249 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_185298_010 Hb_185298_010 Hb_003414_050 Hb_003414_050 Hb_185298_010--Hb_003414_050 Hb_000406_080 Hb_000406_080 Hb_185298_010--Hb_000406_080 Hb_181385_010 Hb_181385_010 Hb_185298_010--Hb_181385_010 Hb_000365_250 Hb_000365_250 Hb_185298_010--Hb_000365_250 Hb_002983_050 Hb_002983_050 Hb_185298_010--Hb_002983_050 Hb_000264_360 Hb_000264_360 Hb_185298_010--Hb_000264_360 Hb_003671_020 Hb_003671_020 Hb_003414_050--Hb_003671_020 Hb_009615_070 Hb_009615_070 Hb_003414_050--Hb_009615_070 Hb_000701_100 Hb_000701_100 Hb_003414_050--Hb_000701_100 Hb_000125_100 Hb_000125_100 Hb_003414_050--Hb_000125_100 Hb_000483_390 Hb_000483_390 Hb_003414_050--Hb_000483_390 Hb_007009_010 Hb_007009_010 Hb_003414_050--Hb_007009_010 Hb_000417_040 Hb_000417_040 Hb_000406_080--Hb_000417_040 Hb_000329_110 Hb_000329_110 Hb_000406_080--Hb_000329_110 Hb_001225_080 Hb_001225_080 Hb_000406_080--Hb_001225_080 Hb_001057_040 Hb_001057_040 Hb_000406_080--Hb_001057_040 Hb_000645_090 Hb_000645_090 Hb_000406_080--Hb_000645_090 Hb_000406_080--Hb_181385_010 Hb_000125_080 Hb_000125_080 Hb_181385_010--Hb_000125_080 Hb_004473_040 Hb_004473_040 Hb_181385_010--Hb_004473_040 Hb_181385_010--Hb_002983_050 Hb_181385_010--Hb_000417_040 Hb_181385_010--Hb_001057_040 Hb_000066_090 Hb_000066_090 Hb_000365_250--Hb_000066_090 Hb_012340_050 Hb_012340_050 Hb_000365_250--Hb_012340_050 Hb_000638_170 Hb_000638_170 Hb_000365_250--Hb_000638_170 Hb_005144_010 Hb_005144_010 Hb_000365_250--Hb_005144_010 Hb_002105_100 Hb_002105_100 Hb_000365_250--Hb_002105_100 Hb_000107_300 Hb_000107_300 Hb_000365_250--Hb_000107_300 Hb_000329_340 Hb_000329_340 Hb_002983_050--Hb_000329_340 Hb_002983_050--Hb_000645_090 Hb_000106_140 Hb_000106_140 Hb_002983_050--Hb_000106_140 Hb_000023_090 Hb_000023_090 Hb_002983_050--Hb_000023_090 Hb_148113_010 Hb_148113_010 Hb_002983_050--Hb_148113_010 Hb_002983_050--Hb_000406_080 Hb_000264_360--Hb_000066_090 Hb_000264_360--Hb_000406_080 Hb_000264_360--Hb_000125_080 Hb_000009_240 Hb_000009_240 Hb_000264_360--Hb_000009_240 Hb_000670_050 Hb_000670_050 Hb_000264_360--Hb_000670_050 Hb_000264_360--Hb_181385_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.549942 1.72144 0.38832 3.4883 2.38071 1.87947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.37983 4.73561 2.27122 0.680747 1.13709

CAGE analysis