Hb_003867_030

Information

Type -
Description -
Location Contig3867: 58834-68025
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003867_030 0.0 - - -
2 Hb_002218_060 0.1357697941 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002890_350 0.1553854845 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
4 Hb_091913_010 0.1656376234 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
5 Hb_006873_030 0.18136967 - - receptor serine/threonine kinase, putative [Ricinus communis]
6 Hb_006717_020 0.183050592 - - calcium-dependent protein kinase [Hevea brasiliensis]
7 Hb_010091_040 0.1864855533 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
8 Hb_001677_130 0.1883200987 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
9 Hb_002284_040 0.1914438332 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_030370_070 0.1951066833 - - ATP binding protein, putative [Ricinus communis]
11 Hb_008897_020 0.1951487391 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Musa acuminata subsp. malaccensis]
12 Hb_000029_180 0.200576837 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
13 Hb_052764_010 0.2050233056 - - hypothetical protein POPTR_0011s04320g [Populus trichocarpa]
14 Hb_000117_110 0.2100515962 - - transferase, putative [Ricinus communis]
15 Hb_000205_220 0.2102975575 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
16 Hb_107552_020 0.2116283145 - - Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
17 Hb_000640_280 0.2125930678 - - Stachyose synthase precursor, putative [Ricinus communis]
18 Hb_000398_200 0.2128588558 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
19 Hb_009403_010 0.2144240908 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
20 Hb_034013_010 0.2152004769 - - hypothetical protein JCGZ_21944 [Jatropha curcas]

Gene co-expression network

sample Hb_003867_030 Hb_003867_030 Hb_002218_060 Hb_002218_060 Hb_003867_030--Hb_002218_060 Hb_002890_350 Hb_002890_350 Hb_003867_030--Hb_002890_350 Hb_091913_010 Hb_091913_010 Hb_003867_030--Hb_091913_010 Hb_006873_030 Hb_006873_030 Hb_003867_030--Hb_006873_030 Hb_006717_020 Hb_006717_020 Hb_003867_030--Hb_006717_020 Hb_010091_040 Hb_010091_040 Hb_003867_030--Hb_010091_040 Hb_000029_180 Hb_000029_180 Hb_002218_060--Hb_000029_180 Hb_000117_110 Hb_000117_110 Hb_002218_060--Hb_000117_110 Hb_001677_130 Hb_001677_130 Hb_002218_060--Hb_001677_130 Hb_000398_200 Hb_000398_200 Hb_002218_060--Hb_000398_200 Hb_030370_070 Hb_030370_070 Hb_002218_060--Hb_030370_070 Hb_009785_020 Hb_009785_020 Hb_002890_350--Hb_009785_020 Hb_000640_280 Hb_000640_280 Hb_002890_350--Hb_000640_280 Hb_009403_010 Hb_009403_010 Hb_002890_350--Hb_009403_010 Hb_034013_010 Hb_034013_010 Hb_002890_350--Hb_034013_010 Hb_000392_510 Hb_000392_510 Hb_002890_350--Hb_000392_510 Hb_008897_020 Hb_008897_020 Hb_091913_010--Hb_008897_020 Hb_091913_010--Hb_001677_130 Hb_007328_010 Hb_007328_010 Hb_091913_010--Hb_007328_010 Hb_045414_010 Hb_045414_010 Hb_091913_010--Hb_045414_010 Hb_091913_010--Hb_000117_110 Hb_039650_030 Hb_039650_030 Hb_091913_010--Hb_039650_030 Hb_003811_030 Hb_003811_030 Hb_006873_030--Hb_003811_030 Hb_012496_010 Hb_012496_010 Hb_006873_030--Hb_012496_010 Hb_006873_030--Hb_039650_030 Hb_113396_020 Hb_113396_020 Hb_006873_030--Hb_113396_020 Hb_035677_010 Hb_035677_010 Hb_006873_030--Hb_035677_010 Hb_000247_150 Hb_000247_150 Hb_006873_030--Hb_000247_150 Hb_000892_040 Hb_000892_040 Hb_006717_020--Hb_000892_040 Hb_004108_200 Hb_004108_200 Hb_006717_020--Hb_004108_200 Hb_006717_020--Hb_002218_060 Hb_001031_020 Hb_001031_020 Hb_006717_020--Hb_001031_020 Hb_001821_070 Hb_001821_070 Hb_006717_020--Hb_001821_070 Hb_080873_010 Hb_080873_010 Hb_006717_020--Hb_080873_010 Hb_052764_010 Hb_052764_010 Hb_010091_040--Hb_052764_010 Hb_000205_220 Hb_000205_220 Hb_010091_040--Hb_000205_220 Hb_002284_040 Hb_002284_040 Hb_010091_040--Hb_002284_040 Hb_007858_030 Hb_007858_030 Hb_010091_040--Hb_007858_030 Hb_000002_280 Hb_000002_280 Hb_010091_040--Hb_000002_280 Hb_042141_010 Hb_042141_010 Hb_010091_040--Hb_042141_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.511614 0.0369839 0.0496823 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.169281

CAGE analysis