Hb_045414_010

Information

Type -
Description -
Location Contig45414: 910-2877
Sequence    

Annotation

kegg
ID cic:CICLE_v10000156mg
description hypothetical protein
nr
ID CBI19895.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q9SYQ8
description Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3
trembl
ID A0A067HB47
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002010mg PE=4 SV=1
Gene Ontology
ID GO:0016020
description receptor protein kinase clavata1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045414_010 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_000563_380 0.1215709228 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
3 Hb_091913_010 0.1332282146 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
4 Hb_008897_020 0.1434064593 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Musa acuminata subsp. malaccensis]
5 Hb_005643_020 0.1454375808 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
6 Hb_005588_010 0.1464736987 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
7 Hb_002864_040 0.1494672788 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
8 Hb_007850_050 0.1571637473 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
9 Hb_007328_010 0.1580298126 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
10 Hb_000522_120 0.1659937712 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
11 Hb_001405_260 0.1682130707 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
12 Hb_033153_010 0.1774785349 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
13 Hb_141990_050 0.1803232894 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
14 Hb_000117_110 0.1835761225 - - transferase, putative [Ricinus communis]
15 Hb_000522_020 0.1876525768 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
16 Hb_001677_130 0.1894893162 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
17 Hb_005648_030 0.1910696541 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
18 Hb_000059_160 0.1911672339 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
19 Hb_001031_020 0.1915263468 - - hypothetical protein VITISV_000631 [Vitis vinifera]
20 Hb_000635_170 0.1940898608 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_045414_010 Hb_045414_010 Hb_000563_380 Hb_000563_380 Hb_045414_010--Hb_000563_380 Hb_091913_010 Hb_091913_010 Hb_045414_010--Hb_091913_010 Hb_008897_020 Hb_008897_020 Hb_045414_010--Hb_008897_020 Hb_005643_020 Hb_005643_020 Hb_045414_010--Hb_005643_020 Hb_005588_010 Hb_005588_010 Hb_045414_010--Hb_005588_010 Hb_002864_040 Hb_002864_040 Hb_045414_010--Hb_002864_040 Hb_008931_020 Hb_008931_020 Hb_000563_380--Hb_008931_020 Hb_001031_020 Hb_001031_020 Hb_000563_380--Hb_001031_020 Hb_000563_380--Hb_005588_010 Hb_000635_170 Hb_000635_170 Hb_000563_380--Hb_000635_170 Hb_033153_010 Hb_033153_010 Hb_000563_380--Hb_033153_010 Hb_091913_010--Hb_008897_020 Hb_001677_130 Hb_001677_130 Hb_091913_010--Hb_001677_130 Hb_007328_010 Hb_007328_010 Hb_091913_010--Hb_007328_010 Hb_000117_110 Hb_000117_110 Hb_091913_010--Hb_000117_110 Hb_039650_030 Hb_039650_030 Hb_091913_010--Hb_039650_030 Hb_113396_020 Hb_113396_020 Hb_008897_020--Hb_113396_020 Hb_008897_020--Hb_007328_010 Hb_008897_020--Hb_000563_380 Hb_048538_010 Hb_048538_010 Hb_008897_020--Hb_048538_010 Hb_001405_260 Hb_001405_260 Hb_005643_020--Hb_001405_260 Hb_005643_020--Hb_005588_010 Hb_000522_120 Hb_000522_120 Hb_005643_020--Hb_000522_120 Hb_005648_030 Hb_005648_030 Hb_005643_020--Hb_005648_030 Hb_044026_010 Hb_044026_010 Hb_005643_020--Hb_044026_010 Hb_002193_050 Hb_002193_050 Hb_005643_020--Hb_002193_050 Hb_005588_010--Hb_001405_260 Hb_005588_010--Hb_005648_030 Hb_005588_010--Hb_000522_120 Hb_005588_010--Hb_033153_010 Hb_022630_010 Hb_022630_010 Hb_005588_010--Hb_022630_010 Hb_007850_050 Hb_007850_050 Hb_002864_040--Hb_007850_050 Hb_000876_060 Hb_000876_060 Hb_002864_040--Hb_000876_060 Hb_004096_040 Hb_004096_040 Hb_002864_040--Hb_004096_040 Hb_015473_020 Hb_015473_020 Hb_002864_040--Hb_015473_020 Hb_000215_120 Hb_000215_120 Hb_002864_040--Hb_000215_120 Hb_000846_020 Hb_000846_020 Hb_002864_040--Hb_000846_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.67444 0.248317 0.0580166 0.0674595 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0332371 0.252915

CAGE analysis