Hb_091913_010

Information

Type -
Description -
Location Contig91913: 1349-2329
Sequence    

Annotation

kegg
ID mdm:103427605
description disease resistance protein RPM1-like
nr
ID XP_012077051.1
description PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
swissprot
ID Q39214
description Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1
trembl
ID A0A067LB31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17219 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091913_010 0.0 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
2 Hb_008897_020 0.0824099215 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Musa acuminata subsp. malaccensis]
3 Hb_001677_130 0.1127343823 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
4 Hb_007328_010 0.1240403922 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
5 Hb_045414_010 0.1332282146 - - unnamed protein product [Vitis vinifera]
6 Hb_000117_110 0.1337534354 - - transferase, putative [Ricinus communis]
7 Hb_039650_030 0.1389049024 - - hypothetical protein RCOM_2128750 [Ricinus communis]
8 Hb_002218_060 0.1479725495 - - conserved hypothetical protein [Ricinus communis]
9 Hb_141990_050 0.1497343762 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
10 Hb_000398_200 0.1533162708 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
11 Hb_000563_380 0.1536470159 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
12 Hb_005545_080 0.1548660394 - - hypothetical protein JCGZ_01293 [Jatropha curcas]
13 Hb_006873_030 0.1572975176 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_000059_160 0.158870527 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
15 Hb_113396_020 0.1631238682 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
16 Hb_004924_030 0.1655967693 - - -
17 Hb_003867_030 0.1656376234 - - -
18 Hb_000522_120 0.1676167564 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
19 Hb_010327_010 0.168199546 - - calcium ion binding protein, putative [Ricinus communis]
20 Hb_005588_010 0.1707848944 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_091913_010 Hb_091913_010 Hb_008897_020 Hb_008897_020 Hb_091913_010--Hb_008897_020 Hb_001677_130 Hb_001677_130 Hb_091913_010--Hb_001677_130 Hb_007328_010 Hb_007328_010 Hb_091913_010--Hb_007328_010 Hb_045414_010 Hb_045414_010 Hb_091913_010--Hb_045414_010 Hb_000117_110 Hb_000117_110 Hb_091913_010--Hb_000117_110 Hb_039650_030 Hb_039650_030 Hb_091913_010--Hb_039650_030 Hb_113396_020 Hb_113396_020 Hb_008897_020--Hb_113396_020 Hb_008897_020--Hb_007328_010 Hb_000563_380 Hb_000563_380 Hb_008897_020--Hb_000563_380 Hb_048538_010 Hb_048538_010 Hb_008897_020--Hb_048538_010 Hb_008897_020--Hb_045414_010 Hb_000398_200 Hb_000398_200 Hb_001677_130--Hb_000398_200 Hb_001677_130--Hb_000117_110 Hb_001677_130--Hb_007328_010 Hb_004712_140 Hb_004712_140 Hb_001677_130--Hb_004712_140 Hb_010327_010 Hb_010327_010 Hb_001677_130--Hb_010327_010 Hb_141990_050 Hb_141990_050 Hb_007328_010--Hb_141990_050 Hb_009189_010 Hb_009189_010 Hb_007328_010--Hb_009189_010 Hb_000522_120 Hb_000522_120 Hb_007328_010--Hb_000522_120 Hb_002849_030 Hb_002849_030 Hb_007328_010--Hb_002849_030 Hb_073870_020 Hb_073870_020 Hb_007328_010--Hb_073870_020 Hb_045414_010--Hb_000563_380 Hb_005643_020 Hb_005643_020 Hb_045414_010--Hb_005643_020 Hb_005588_010 Hb_005588_010 Hb_045414_010--Hb_005588_010 Hb_002864_040 Hb_002864_040 Hb_045414_010--Hb_002864_040 Hb_000117_110--Hb_000398_200 Hb_000117_110--Hb_004712_140 Hb_000117_110--Hb_010327_010 Hb_002218_060 Hb_002218_060 Hb_000117_110--Hb_002218_060 Hb_000175_250 Hb_000175_250 Hb_039650_030--Hb_000175_250 Hb_004924_030 Hb_004924_030 Hb_039650_030--Hb_004924_030 Hb_000247_150 Hb_000247_150 Hb_039650_030--Hb_000247_150 Hb_006873_030 Hb_006873_030 Hb_039650_030--Hb_006873_030 Hb_035677_010 Hb_035677_010 Hb_039650_030--Hb_035677_010 Hb_039650_030--Hb_007328_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.80465 0.174622 0.0718758 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0164241 0.250185

CAGE analysis