Hb_007850_050

Information

Type -
Description -
Location Contig7850: 51523-53184
Sequence    

Annotation

kegg
ID rcu:RCOM_1467540
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID XP_002514610.1
description flavonoid 3-hydroxylase, putative [Ricinus communis]
swissprot
ID H2DH18
description Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1
trembl
ID B9RLJ1
description Flavonoid 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_1467540 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp736a12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007850_050 0.0 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
2 Hb_002864_040 0.0747392078 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
3 Hb_005648_030 0.1000957531 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
4 Hb_001403_070 0.1120596283 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]
5 Hb_033153_010 0.1150247862 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
6 Hb_001405_260 0.1152131032 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
7 Hb_078477_010 0.116783479 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
8 Hb_022630_010 0.1220654762 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
9 Hb_005000_230 0.1264720488 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
10 Hb_001511_130 0.1268802798 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
11 Hb_005588_010 0.1317567402 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
12 Hb_005643_020 0.1345112881 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
13 Hb_039650_010 0.1376215335 - - cellulose synthase-like protein [Populus tomentosa]
14 Hb_002193_050 0.1385402103 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
15 Hb_000699_200 0.1409620173 - - hypothetical protein POPTR_0019s02340g [Populus trichocarpa]
16 Hb_030312_060 0.1428272786 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
17 Hb_000215_120 0.1449425867 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
18 Hb_000333_150 0.1471825407 - - hypothetical protein RCOM_0711500 [Ricinus communis]
19 Hb_000016_290 0.1494173797 - - multidrug resistance pump, putative [Ricinus communis]
20 Hb_006124_040 0.1517198203 - - Rhicadhesin receptor precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_007850_050 Hb_007850_050 Hb_002864_040 Hb_002864_040 Hb_007850_050--Hb_002864_040 Hb_005648_030 Hb_005648_030 Hb_007850_050--Hb_005648_030 Hb_001403_070 Hb_001403_070 Hb_007850_050--Hb_001403_070 Hb_033153_010 Hb_033153_010 Hb_007850_050--Hb_033153_010 Hb_001405_260 Hb_001405_260 Hb_007850_050--Hb_001405_260 Hb_078477_010 Hb_078477_010 Hb_007850_050--Hb_078477_010 Hb_000876_060 Hb_000876_060 Hb_002864_040--Hb_000876_060 Hb_004096_040 Hb_004096_040 Hb_002864_040--Hb_004096_040 Hb_015473_020 Hb_015473_020 Hb_002864_040--Hb_015473_020 Hb_000215_120 Hb_000215_120 Hb_002864_040--Hb_000215_120 Hb_000846_020 Hb_000846_020 Hb_002864_040--Hb_000846_020 Hb_005648_030--Hb_078477_010 Hb_022630_010 Hb_022630_010 Hb_005648_030--Hb_022630_010 Hb_005648_030--Hb_001405_260 Hb_044026_010 Hb_044026_010 Hb_005648_030--Hb_044026_010 Hb_005588_010 Hb_005588_010 Hb_005648_030--Hb_005588_010 Hb_005648_030--Hb_033153_010 Hb_001749_020 Hb_001749_020 Hb_001403_070--Hb_001749_020 Hb_006124_040 Hb_006124_040 Hb_001403_070--Hb_006124_040 Hb_001403_070--Hb_022630_010 Hb_011924_030 Hb_011924_030 Hb_001403_070--Hb_011924_030 Hb_001486_130 Hb_001486_130 Hb_001403_070--Hb_001486_130 Hb_006452_140 Hb_006452_140 Hb_001403_070--Hb_006452_140 Hb_000414_100 Hb_000414_100 Hb_033153_010--Hb_000414_100 Hb_002760_060 Hb_002760_060 Hb_033153_010--Hb_002760_060 Hb_033153_010--Hb_001405_260 Hb_033153_010--Hb_005588_010 Hb_001405_260--Hb_044026_010 Hb_005643_020 Hb_005643_020 Hb_001405_260--Hb_005643_020 Hb_001405_260--Hb_005588_010 Hb_001405_260--Hb_078477_010 Hb_001405_260--Hb_022630_010 Hb_078477_010--Hb_022630_010 Hb_000333_150 Hb_000333_150 Hb_078477_010--Hb_000333_150 Hb_004656_030 Hb_004656_030 Hb_078477_010--Hb_004656_030 Hb_078477_010--Hb_044026_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.64711 0.142243 0.0512751 0.0508539 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.162184 0.0500667

CAGE analysis