Hb_167103_010

Information

Type -
Description -
Location Contig167103: 47-1142
Sequence    

Annotation

kegg
ID rcu:RCOM_0436260
description hypothetical protein
nr
ID XP_012089968.1
description PREDICTED: transcriptional activator DEMETER isoform X1 [Jatropha curcas]
swissprot
ID Q8LK56
description Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2
trembl
ID A0A067LCQ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01528 PE=4 SV=1
Gene Ontology
ID GO:0003824
description dna n-glycosylase dna-(apurinic or apyrimidinic site) isoform 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167103_010 0.0 - - PREDICTED: transcriptional activator DEMETER isoform X1 [Jatropha curcas]
2 Hb_000529_180 0.117014032 - - PREDICTED: mechanosensitive ion channel protein 2, chloroplastic [Jatropha curcas]
3 Hb_000613_120 0.1183511487 transcription factor TF Family: SET PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Jatropha curcas]
4 Hb_001438_010 0.1193591128 - - PREDICTED: uncharacterized protein LOC105639111 isoform X1 [Jatropha curcas]
5 Hb_004109_260 0.1205627499 - - hypothetical protein JCGZ_06843 [Jatropha curcas]
6 Hb_002660_190 0.1217048075 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
7 Hb_006905_030 0.126744234 - - -
8 Hb_006846_070 0.1271169808 - - PREDICTED: staphylococcal nuclease domain-containing protein 1 [Jatropha curcas]
9 Hb_001824_080 0.1293178698 - - PREDICTED: 2-aminoethanethiol dioxygenase isoform X1 [Jatropha curcas]
10 Hb_005601_020 0.1298565016 - - PREDICTED: ankyrin repeat domain-containing protein 2 [Jatropha curcas]
11 Hb_001427_040 0.1315581103 - - PREDICTED: uncharacterized protein LOC105637784 [Jatropha curcas]
12 Hb_002025_250 0.1328286957 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Jatropha curcas]
13 Hb_004884_180 0.1349147436 - - PREDICTED: protein TIC 56, chloroplastic [Jatropha curcas]
14 Hb_155832_010 0.1377934946 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
15 Hb_010344_020 0.1400060959 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Jatropha curcas]
16 Hb_000802_130 0.1408536459 - - hypothetical protein JCGZ_04636 [Jatropha curcas]
17 Hb_000363_060 0.1410825011 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
18 Hb_000220_210 0.141247593 - - PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas]
19 Hb_000046_540 0.1428144191 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Populus euphratica]
20 Hb_004339_040 0.1430012718 - - hypothetical protein POPTR_0162s00290g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_167103_010 Hb_167103_010 Hb_000529_180 Hb_000529_180 Hb_167103_010--Hb_000529_180 Hb_000613_120 Hb_000613_120 Hb_167103_010--Hb_000613_120 Hb_001438_010 Hb_001438_010 Hb_167103_010--Hb_001438_010 Hb_004109_260 Hb_004109_260 Hb_167103_010--Hb_004109_260 Hb_002660_190 Hb_002660_190 Hb_167103_010--Hb_002660_190 Hb_006905_030 Hb_006905_030 Hb_167103_010--Hb_006905_030 Hb_002675_250 Hb_002675_250 Hb_000529_180--Hb_002675_250 Hb_010863_050 Hb_010863_050 Hb_000529_180--Hb_010863_050 Hb_008705_020 Hb_008705_020 Hb_000529_180--Hb_008705_020 Hb_000167_110 Hb_000167_110 Hb_000529_180--Hb_000167_110 Hb_000529_180--Hb_001438_010 Hb_000046_540 Hb_000046_540 Hb_000529_180--Hb_000046_540 Hb_010174_090 Hb_010174_090 Hb_000613_120--Hb_010174_090 Hb_000802_130 Hb_000802_130 Hb_000613_120--Hb_000802_130 Hb_001789_160 Hb_001789_160 Hb_000613_120--Hb_001789_160 Hb_006787_090 Hb_006787_090 Hb_000613_120--Hb_006787_090 Hb_000613_120--Hb_004109_260 Hb_031042_060 Hb_031042_060 Hb_000613_120--Hb_031042_060 Hb_007741_110 Hb_007741_110 Hb_001438_010--Hb_007741_110 Hb_003053_110 Hb_003053_110 Hb_001438_010--Hb_003053_110 Hb_001195_770 Hb_001195_770 Hb_001438_010--Hb_001195_770 Hb_006907_060 Hb_006907_060 Hb_001438_010--Hb_006907_060 Hb_000941_100 Hb_000941_100 Hb_001438_010--Hb_000941_100 Hb_001824_080 Hb_001824_080 Hb_004109_260--Hb_001824_080 Hb_004339_040 Hb_004339_040 Hb_004109_260--Hb_004339_040 Hb_004109_260--Hb_000802_130 Hb_004109_260--Hb_001438_010 Hb_000880_070 Hb_000880_070 Hb_004109_260--Hb_000880_070 Hb_001427_040 Hb_001427_040 Hb_002660_190--Hb_001427_040 Hb_004108_060 Hb_004108_060 Hb_002660_190--Hb_004108_060 Hb_002282_070 Hb_002282_070 Hb_002660_190--Hb_002282_070 Hb_011861_050 Hb_011861_050 Hb_002660_190--Hb_011861_050 Hb_000345_370 Hb_000345_370 Hb_002660_190--Hb_000345_370 Hb_003475_020 Hb_003475_020 Hb_002660_190--Hb_003475_020 Hb_006573_150 Hb_006573_150 Hb_006905_030--Hb_006573_150 Hb_005601_020 Hb_005601_020 Hb_006905_030--Hb_005601_020 Hb_001981_040 Hb_001981_040 Hb_006905_030--Hb_001981_040 Hb_000062_510 Hb_000062_510 Hb_006905_030--Hb_000062_510 Hb_114893_040 Hb_114893_040 Hb_006905_030--Hb_114893_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.761074 0.484923 1.93702 0.503203 0.891932 0.45608
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.622873 0.435335 1.08087 0.991823 2.50759

CAGE analysis