Hb_002660_190

Information

Type -
Description -
Location Contig2660: 153634-158245
Sequence    

Annotation

kegg
ID pop:POPTR_0016s09000g
description POPTRDRAFT_576677; hypothetical protein
nr
ID XP_012082338.1
description PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
swissprot
ID Q9LYW9
description DnaJ protein P58IPK homolog OS=Arabidopsis thaliana GN=P58IPK PE=1 SV=1
trembl
ID A0A067JYX8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16491 PE=4 SV=1
Gene Ontology
ID GO:0005788
description dnaj protein p58ipk homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27805: 156161-157777
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002660_190 0.0 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
2 Hb_001427_040 0.0864093873 - - PREDICTED: uncharacterized protein LOC105637784 [Jatropha curcas]
3 Hb_004108_060 0.0879249677 - - hypothetical protein JCGZ_21975 [Jatropha curcas]
4 Hb_002282_070 0.0929488231 - - PREDICTED: protein DJ-1 homolog C isoform X2 [Jatropha curcas]
5 Hb_011861_050 0.0946872565 - - PREDICTED: COBW domain-containing protein 1 [Jatropha curcas]
6 Hb_000345_370 0.0997357994 - - PREDICTED: probable Xaa-Pro aminopeptidase P [Jatropha curcas]
7 Hb_003475_020 0.1025390956 - - hypothetical protein JCGZ_13177 [Jatropha curcas]
8 Hb_003777_020 0.1035109044 - - Fructose-1,6-bisphosphatase, cytosolic, putative [Ricinus communis]
9 Hb_000340_150 0.1045422771 - - hypothetical protein JCGZ_21975 [Jatropha curcas]
10 Hb_000220_210 0.104901626 - - PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas]
11 Hb_004375_050 0.1056948625 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
12 Hb_001472_160 0.105836949 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
13 Hb_005147_080 0.1062187954 - - PREDICTED: prolycopene isomerase, chloroplastic isoform X1 [Jatropha curcas]
14 Hb_016461_030 0.1079664861 - - PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
15 Hb_000318_130 0.1099187956 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_002685_060 0.1110539872 - - 30S ribosomal protein S5, putative [Ricinus communis]
17 Hb_000144_060 0.1113103902 - - PREDICTED: uncharacterized protein At5g03900, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_001790_080 0.1123590535 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Jatropha curcas]
19 Hb_000529_180 0.114713561 - - PREDICTED: mechanosensitive ion channel protein 2, chloroplastic [Jatropha curcas]
20 Hb_001438_010 0.1152874896 - - PREDICTED: uncharacterized protein LOC105639111 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002660_190 Hb_002660_190 Hb_001427_040 Hb_001427_040 Hb_002660_190--Hb_001427_040 Hb_004108_060 Hb_004108_060 Hb_002660_190--Hb_004108_060 Hb_002282_070 Hb_002282_070 Hb_002660_190--Hb_002282_070 Hb_011861_050 Hb_011861_050 Hb_002660_190--Hb_011861_050 Hb_000345_370 Hb_000345_370 Hb_002660_190--Hb_000345_370 Hb_003475_020 Hb_003475_020 Hb_002660_190--Hb_003475_020 Hb_001427_040--Hb_002282_070 Hb_000220_210 Hb_000220_210 Hb_001427_040--Hb_000220_210 Hb_016461_030 Hb_016461_030 Hb_001427_040--Hb_016461_030 Hb_002542_160 Hb_002542_160 Hb_001427_040--Hb_002542_160 Hb_001427_040--Hb_000345_370 Hb_001472_160 Hb_001472_160 Hb_004108_060--Hb_001472_160 Hb_004108_060--Hb_002282_070 Hb_000529_180 Hb_000529_180 Hb_004108_060--Hb_000529_180 Hb_001377_040 Hb_001377_040 Hb_004108_060--Hb_001377_040 Hb_004108_060--Hb_001427_040 Hb_002282_070--Hb_016461_030 Hb_002282_070--Hb_000345_370 Hb_003777_020 Hb_003777_020 Hb_002282_070--Hb_003777_020 Hb_002685_060 Hb_002685_060 Hb_002282_070--Hb_002685_060 Hb_000144_060 Hb_000144_060 Hb_002282_070--Hb_000144_060 Hb_000480_040 Hb_000480_040 Hb_011861_050--Hb_000480_040 Hb_011861_050--Hb_000144_060 Hb_011861_050--Hb_000345_370 Hb_000309_020 Hb_000309_020 Hb_011861_050--Hb_000309_020 Hb_000941_100 Hb_000941_100 Hb_011861_050--Hb_000941_100 Hb_005147_080 Hb_005147_080 Hb_011861_050--Hb_005147_080 Hb_000345_370--Hb_000144_060 Hb_000345_370--Hb_002542_160 Hb_000345_370--Hb_000220_210 Hb_000345_370--Hb_000309_020 Hb_000345_370--Hb_016461_030 Hb_003994_110 Hb_003994_110 Hb_003475_020--Hb_003994_110 Hb_001790_080 Hb_001790_080 Hb_003475_020--Hb_001790_080 Hb_000676_200 Hb_000676_200 Hb_003475_020--Hb_000676_200 Hb_000130_320 Hb_000130_320 Hb_003475_020--Hb_000130_320 Hb_002232_390 Hb_002232_390 Hb_003475_020--Hb_002232_390 Hb_003475_020--Hb_002282_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.98138 9.55141 17.8359 7.22105 9.09596 7.4901
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.50193 8.5364 11.1791 7.73212 40.1312

CAGE analysis