Hb_000130_320

Information

Type desease resistance
Description Gene Name: AAA
Location Contig130: 272484-286440
Sequence    

Annotation

kegg
ID rcu:RCOM_1694080
description Stage III sporulation protein AA, putative
nr
ID XP_012078547.1
description PREDICTED: uncharacterized protein ycf45 [Jatropha curcas]
swissprot
ID P51281
description Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1
trembl
ID A0A067K8C4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14699 PE=4 SV=1
Gene Ontology
ID GO:0009507
description stage iii sporulation protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08925: 272498-286380 , PASA_asmbl_08926: 274587-274762
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000130_320 0.0 desease resistance Gene Name: AAA PREDICTED: uncharacterized protein ycf45 [Jatropha curcas]
2 Hb_000648_040 0.0631250469 - - unknown [Populus trichocarpa]
3 Hb_002758_010 0.0668992322 - - PREDICTED: ribonuclease II, chloroplastic/mitochondrial [Populus euphratica]
4 Hb_001790_080 0.0699293693 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Jatropha curcas]
5 Hb_032920_050 0.0755077329 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Jatropha curcas]
6 Hb_000749_090 0.0763064662 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_001936_090 0.0789644198 - - PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Jatropha curcas]
8 Hb_005731_160 0.0792488711 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_013405_080 0.0815243024 - - PREDICTED: proline--tRNA ligase [Jatropha curcas]
10 Hb_036790_080 0.0827098883 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Jatropha curcas]
11 Hb_003475_020 0.0833939203 - - hypothetical protein JCGZ_13177 [Jatropha curcas]
12 Hb_009252_040 0.0860105291 - - PREDICTED: protein EXECUTER 2, chloroplastic [Jatropha curcas]
13 Hb_000613_110 0.0890235263 - - PREDICTED: uncharacterized protein LOC105641540 [Jatropha curcas]
14 Hb_007763_070 0.0919709228 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Jatropha curcas]
15 Hb_000007_010 0.0923798873 - - PREDICTED: protein PHYLLO, chloroplastic [Jatropha curcas]
16 Hb_001163_060 0.0923905776 - - neutral/alkaline invertase [Manihot esculenta]
17 Hb_000087_140 0.0940936918 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27270 isoform X1 [Jatropha curcas]
18 Hb_005253_030 0.0941620523 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_017469_110 0.0970157798 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
20 Hb_000599_270 0.0982463487 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_000130_320 Hb_000130_320 Hb_000648_040 Hb_000648_040 Hb_000130_320--Hb_000648_040 Hb_002758_010 Hb_002758_010 Hb_000130_320--Hb_002758_010 Hb_001790_080 Hb_001790_080 Hb_000130_320--Hb_001790_080 Hb_032920_050 Hb_032920_050 Hb_000130_320--Hb_032920_050 Hb_000749_090 Hb_000749_090 Hb_000130_320--Hb_000749_090 Hb_001936_090 Hb_001936_090 Hb_000130_320--Hb_001936_090 Hb_005731_160 Hb_005731_160 Hb_000648_040--Hb_005731_160 Hb_001080_070 Hb_001080_070 Hb_000648_040--Hb_001080_070 Hb_000648_040--Hb_002758_010 Hb_000613_110 Hb_000613_110 Hb_000648_040--Hb_000613_110 Hb_003475_020 Hb_003475_020 Hb_000648_040--Hb_003475_020 Hb_002205_230 Hb_002205_230 Hb_002758_010--Hb_002205_230 Hb_002758_010--Hb_005731_160 Hb_002758_010--Hb_001936_090 Hb_005253_030 Hb_005253_030 Hb_002758_010--Hb_005253_030 Hb_001589_010 Hb_001589_010 Hb_002758_010--Hb_001589_010 Hb_000349_240 Hb_000349_240 Hb_001790_080--Hb_000349_240 Hb_029584_070 Hb_029584_070 Hb_001790_080--Hb_029584_070 Hb_001163_060 Hb_001163_060 Hb_001790_080--Hb_001163_060 Hb_001790_080--Hb_003475_020 Hb_001790_080--Hb_001936_090 Hb_036790_080 Hb_036790_080 Hb_032920_050--Hb_036790_080 Hb_032920_050--Hb_000613_110 Hb_000479_250 Hb_000479_250 Hb_032920_050--Hb_000479_250 Hb_003994_110 Hb_003994_110 Hb_032920_050--Hb_003994_110 Hb_007101_080 Hb_007101_080 Hb_032920_050--Hb_007101_080 Hb_008387_020 Hb_008387_020 Hb_000749_090--Hb_008387_020 Hb_000731_010 Hb_000731_010 Hb_000749_090--Hb_000731_010 Hb_009252_040 Hb_009252_040 Hb_000749_090--Hb_009252_040 Hb_000568_050 Hb_000568_050 Hb_000749_090--Hb_000568_050 Hb_007763_070 Hb_007763_070 Hb_000749_090--Hb_007763_070 Hb_001936_090--Hb_029584_070 Hb_000720_050 Hb_000720_050 Hb_001936_090--Hb_000720_050 Hb_188281_040 Hb_188281_040 Hb_001936_090--Hb_188281_040 Hb_001347_060 Hb_001347_060 Hb_001936_090--Hb_001347_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.3274 5.69254 6.46071 5.34641 4.69163 7.09759
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.02362 5.93278 3.94373 6.75773 18.0682

CAGE analysis